Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00150 ATGATTTGCTCTTTGAGACAACCTAGTATAGGGATCACTGGTTCTGATGTTGTGTTGAGGCAAAAACACGCAACCCCATTTCAAGCATGTTCATTTTTACCTCCTTTGGCGTTGAAGAAAAAACCCCAGAAACATGTTGTTTCGGTGAACAAACCACTGCACGTTGCTTCTGTTAGTGTTGGGAATTTTGGGTCAGTGAAGGATTTGGAGGGTTTTGGAAAGAGAGAGAGTGATGATTTGGTGAAGTGTGGTGCATATGAGGCAGATAGATCAGAGATTGAAGCAGCTGGTCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATATACTTTGCAACATGGTGGGCTTTGAATGTTGTGTTCAATATATATAACAAGAAGGTGTTGAATGCATACCCTTACCCTTGGCTCACATCAACACTTTCACTTGCTTGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACAGGGATTGCTGAATCCCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTACCTGTTGCTGTTGCACACACAATAGGACATGTCGCGGCGACTGTTAGTATGTCGAAAGTTGCAGTGTCTTTTACACATATCATCAAGAGTGGTGAACCTGCTTTTAGTGTCTTGGTTTCCAGATTTCTCCTTGGTGAGACCTTTCCCGTGCCGGTCTATCTATCTTTGATTCCAATTATTGGTGGATGTGCACTTGCCGCTGTTACCGAGCTCAATTTCAATATGACTGGTTTCATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGTAATATCTTTTCGAAGAAGGGCATGAAAGGAAAGTCTGTCAGTGGAATGAATTACTACGCATGCTTATCTATTTTATCCCTTGCACTTCTCACACCATTCGCAATAGCCGTCGAAGGGCCGCAGATGTGGGCAGCTGGATGGCAAATAGCACTCTCTCAAATCGGACCCCAATTCATATGGTGGGTAGCAGCTCAAAGTGTGTTCTACCATCTGTACAACCAAGTGTCATACATGTCTTTGGATGAGATCTCGCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATTTCAGTCATAGTTTCTTCCATCATTATCTTCCATACACCAGTTCAACCTGTCAATGCTCTTGGAGCTGCGATAGCTGTCCTCGGAACCTTCTTATATTCACAGGCAAAACAATAG 1197 0.4344 MICSLRQPSIGITGSDVVLRQKHATPFQACSFLPPLALKKKPQKHVVSVNKPLHVASVSVGNFGSVKDLEGFGKRESDDLVKCGAYEADRSEIEAAGPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAESPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQIALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00150 398 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
Aip01g00150 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 241 - -
Aip01g00150 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Aip01g00150 398 PANTHER SOLUTE CARRIER FAMILY 35 38 397 - -
Aip01g00150 398 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00150 Aip-Chr1 1528721 1531942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00150 42 397 Antiporters AT5G54800 79.670 0.0 568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00405 07 3455263 3459004 Aip01g00150 01 1528721 1531942 ECH
Aip01g00150 01 1528721 1531942 Aip01g00150 01 1528721 1531942 ECH