Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00140 ATGGGAGACGTGGCGAAGGACCTCACGGCGGGGACGGTGGGAGGGGCGGCGCAGCTAATATGCGGCCACCCCTTCGACACCATCAAGGTAAAGCTGCAGAGCCAGCCTACGCCAGTACCCGGTCAGTCTCCAAAGTATTCAGGTGCAATTGATGCTGTGAAGAAGACAGTAGCAGCTGAAGGTCCAAGAGGCTTGTACAAAGGTATGGGGGCCCCACTTGCAACCGTTGCAGCCTTCAATGCCGTGCTGTTTACGGTTAGAGGACAGATGGAAGCATTGGTCAGGACCCAACCTGGTGCTCCCCTCTCAGTTAGCCAGCAGTTTGTTTGCGGCGCCGGCGCCGGCGTTGCTGTTTCCTTCCTTGCTTGCCCCACTGAACTTGTCAAATGCAGGCTGCAAGCACAAAGCGCACTTGCTGGGACCGGAACAGCGGCGGTGGCTGCCGTGAAGTACGGAGGACCAATGGACGTGGCGAGGCAAGTTCTAAGATCAGAAGGCGGCATGAGAGGGCTTTTCAAAGGTTTGATTCCGACCATGGGCCGCGAGATACCGGGAAACGCCATAATGTTTGGTGTCTATGAAGCAATCAAGCAAATGCTTGCAGGGGGCCCTGACACTTCCGGACTAGGCAGAGGATCTCTGATTCTAGCCGGCGGCGTGGCCGGAGCCTCCTTTTGGTTCTTGGTGTATCCAACCGACGTTGTTAAGAGTGTGATCCAAGTTGATGATTACAAGAACCCAAAGTTTTCTGGCTCCTTTGATGCTTTTAGAAAGATTCAAGCTTCCGAAGGTTTAAAAGGCCTTTATAAGGGTTTCGGCCCGGCCATGGCGCGAAGCGTTCCGGCCAACGCCGCCTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGGATGA 897 0.5485 MGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPVPGQSPKYSGAIDAVKKTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALVRTQPGAPLSVSQQFVCGAGAGVAVSFLACPTELVKCRLQAQSALAGTGTAAVAAVKYGGPMDVARQVLRSEGGMRGLFKGLIPTMGREIPGNAIMFGVYEAIKQMLAGGPDTSGLGRGSLILAGGVAGASFWFLVYPTDVVKSVIQVDDYKNPKFSGSFDAFRKIQASEGLKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00140 298 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 298 - -
Aip01g00140 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 296 IPR018108 -
Aip01g00140 298 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Aip01g00140 298 Pfam Mitochondrial carrier protein 215 297 IPR018108 -
Aip01g00140 298 Pfam Mitochondrial carrier protein 102 201 IPR018108 -
Aip01g00140 298 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 298 - -
Aip01g00140 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Aip01g00140 298 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 199 IPR018108 -
Aip01g00140 298 SUPERFAMILY Mitochondrial carrier 3 291 IPR023395 -
Aip01g00140 298 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00140 Aip-Chr1 1455289 1457219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00140 22 297 Antiporters AT1G79900 32.624 5.68e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00140 K15109 - gmx:100791908 522.702