Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00094 ATGAGGAGTGGTAGGAAAAGGAAGTTGCATTTGAGCAAGCTATACTCATTCACATGCTGTAGAGCATCATCTTTTGAAGATGAATTTTATTCTCAGATTGGGGGAAGGGGTTATTCAAGAGTAGTGTTGTGCAATGAGTTGAATGATTTAGAATCCGAGGTTGTTAGGAACTATGCAGATAACTCTGTTAGGTCTACAAAGTACACCCCTGCTACATTCCTCCCTAAATCGCTCTTCGAGCAGTTTAGGAGAGTGGCTAACTTCTATTTCTTGGTTACTGGCATCTTGGCATTCACCAGACTTGCGCCTTATAACGCTGCCAGCGCTATCTTTCCGTTGATTATCGTCGTAGGGGCGACTATGGTGAAGGAAGGCATCGAAGACTGGCGCCGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTGAAAGTGCATAAAGGTGATGGAAATTTCGAATATACCGAGTGGAAGAATCTTAGAGTGGGGAATGTAGTGAAGGTAGAGAAGGATGAGTTCTTCCCTGCAGACCTCCTATTGCTTTCGTCGAGTTATGAGGATGCAGTATGCTATGTTGAGACAACGAATTTGGATGGCGAGACAAATTTGAAGTTGAAACAAGGCTTAGAGATAACTTGTTCCTTACACGGCGATCTCAGCTTCCAAAAGTTTAGAGCCACGGTCAAGTGTGAAGATCCGAATGCTAATCTGTACTCGTTCATTGGGAGCCTAGAATTTGGAGACCAAAAGTATCCCCTTTCACCTCAGCAGCTTCTTCTTCGAGACTCCAAACTTCGCAATACAGACTACATTTTCGGAGCTGTAATCTTCACTGGTCATGATACTAAGGTTATCCAAAATTCTACAGATCCTCCTTCGAAAAGAAGCCGAATTGAGAGGAAGATGGATAGAGTAATCTACTTCTTGTTCTGTATCTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTTACATCTTAACTAAAGATGACTTGCAAAGTGGACCAATGAAAAGATGGTATCTAAGACCTGATGATTCTACAGTTTTCTTCGATCCGAAGAGACCGGAAGCTGCTGCTGCATTTCACTGTTTGACAGCACTGATGTTATATGGCTTCTTTATTCCAATATCCCTTTATGTGTCGATCGAGATTGTCAAAGTTCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTATGAGGAAGCAGACAAGCCGGCAAATGCCCGGACATCAAACTTAAATGAAGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACCGGAACTCTTACATGCAACTCAATGGAGTTTGTTAAATGTTCTATTGCCGGGGTTGCTTACGGCCGTGGCATTACAGAGGTTGAGAAGGCTATGGGTAGAAGAAAAGGTTCACCTCTAAATCATGAACAAGTTATAGGGTCAGAAGCCGACAGCATCAACGAATCTTCGAATGGAAAAGTTTCCATAAAGGGCTTTAACTTCATTGATGAAAGGATAATGAATGGAAATTGGGTTAATGAACCTCATGCTGATGTCATCCAGAGATTCTTTCGCCTGTTGGCTATCTGTCATACGGCTATACCAGAAATGGATGAAGACACAGGAAATGTCTCGTATGAGGCTGAATCGCCCGACGAAGCAGCATTTGTGATTGCAGCCAGAGAAATTGGTTTTGAGTTCTGTAAAAGGACTCAGACTAGTTTATCAACATTTGAGTTGGATCCTGAATCTGGCAAAAAAGTTGAAAGGGTGTACAAGCTTCTCAATGTTTTGGAATTTAATAGCTCGAGGAAGAGGATGTCGGTCATAGTGGAGGATGAAGAAGGAAAAATTTTTCTGTTATGCAAAGGTGCTGATAGTGTCATGTTTGAAAGGCTAGCCAAGAATGGGAGGGAGTTCCAAGATAAGACCATGGAGCATGTTCATGATTATGCCGATGCAGGTCTAAGGACCTTGATACTAGCCTATCGCGAGCTTGATGTGGAAGAATACAAGGAGTTTCATAATAAATTCTCTAAGGCTAAGAATTTAGTTTGTGCGGATCAGGAAAGACAGATTCAGAAAATATCTAACAAGATTGAGAGGAATCTAATTCTTCTTGGAGCCACTGCTGTAGAGGACAAACTCCAAAACGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCAGGAATCAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATAGGTTTTTCTTGTAGTTTGCTAAGACAAGGAATGAAGCAGATTATAATTCATTTGGAGAGTCCAGAAATTAAAGCACTGGAAAAGGGTGGAGACAAGCTTGCTATAATCAAGGCATCTAGGCAAAGTGTCCTCCAACAGATATCTGAAGGTGCTGCACAGCTGACAGCATACAGAGGAAGTTCTCAGCAGGCATTTGCTTTGATCATCGACGGAAACTCGCTTGTCTATGCTCTAGACGATAACGTGAAGCACATGTTTCTAGAGCTTGCGATTCGCTGCGCATCTGTTATCTGCTGTCGCTCGTCACCAAAGCAGAAGGCACTGGTTACTAGATTGGTCAAATCCGGAACTCGGAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGACATAGGAGTTGGAATTAGTGGAGTTGAAGGAATGCAGGCTGTAATGTCTAGTGACATTGCAATTGCGCAATTCCGATACTTGGATCGATTACTTCTCGTGCACGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAACATCACATTCGGATTCACTTTGTTCTTATATGAGGTGTATGCATCATTCTCTGGAGAACCTGCATACAATGATTGGCTTTTATCTATCTATAATGTCTTCTTTTCATCGCTTCCTGTGATTGCTCTCGGGGTGTTCGACCAGGATGTATCCGCTCGGTACTGCCTAAAGTTTCCATTGTTATATCAAGAAGGAGTGCAAAACGTCCTCTTTAGCTGGCGGCGAATACTCGCATGGATGCTTAACGGATTCATCAGCGCCATACTAGTTTTCTTCTTCTGCACGAAAGCCATGGAGCTTCAGGCCTTCGACGCGGAGGGAAGAACGGCCGGGAGGGATATACTCGGCGCAACCATGTACACTTGTGTGGTTTGGGTGGTAAATTTGCAGATAGCTTTAGCTATAAGTTACTTCACCATGATCCAACATATTTTCATCTGGGGTTCCATTGCATTCTGGTACATCTTCCTTCTGGCATACGGCGCAATGCCACCACATTTTTCGACGAATGCCTATAGAGTATTCGCCGAGACTCTGGCGCCGTCTCCGATGTATTGGCTTGTCACATTCTTTGTGGTGATCTCAACACTCATACCATACTTTTCCTACTCAGCAATTCAGATGAGGTTCTTTCCCATGTTTCATGAAATTGTCCAATGGATAAGGTATGAAGGGAAGACAAAGGATCCCGAATATTGTAACATGGTTCGCCAGAGATCGCTCCGGCCAACAACCGTCGGATCAACTGCTCGCCTAGCCGCCATGGCTAACGACACACGAGACAGAACGATTAACCGTAGATAA 3609 0.4281 MRSGRKRKLHLSKLYSFTCCRASSFEDEFYSQIGGRGYSRVVLCNELNDLESEVVRNYADNSVRSTKYTPATFLPKSLFEQFRRVANFYFLVTGILAFTRLAPYNAASAIFPLIIVVGATMVKEGIEDWRRKKQDIEVNNRRVKVHKGDGNFEYTEWKNLRVGNVVKVEKDEFFPADLLLLSSSYEDAVCYVETTNLDGETNLKLKQGLEITCSLHGDLSFQKFRATVKCEDPNANLYSFIGSLEFGDQKYPLSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIERKMDRVIYFLFCILFLMAFVGSIFFYILTKDDLQSGPMKRWYLRPDDSTVFFDPKRPEAAAAFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPANARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGVAYGRGITEVEKAMGRRKGSPLNHEQVIGSEADSINESSNGKVSIKGFNFIDERIMNGNWVNEPHADVIQRFFRLLAICHTAIPEMDEDTGNVSYEAESPDEAAFVIAAREIGFEFCKRTQTSLSTFELDPESGKKVERVYKLLNVLEFNSSRKRMSVIVEDEEGKIFLLCKGADSVMFERLAKNGREFQDKTMEHVHDYADAGLRTLILAYRELDVEEYKEFHNKFSKAKNLVCADQERQIQKISNKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIHLESPEIKALEKGGDKLAIIKASRQSVLQQISEGAAQLTAYRGSSQQAFALIIDGNSLVYALDDNVKHMFLELAIRCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLDRLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGEPAYNDWLLSIYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILAWMLNGFISAILVFFFCTKAMELQAFDAEGRTAGRDILGATMYTCVVWVVNLQIALAISYFTMIQHIFIWGSIAFWYIFLLAYGAMPPHFSTNAYRVFAETLAPSPMYWLVTFFVVISTLIPYFSYSAIQMRFFPMFHEIVQWIRYEGKTKDPEYCNMVRQRSLRPTTVGSTARLAAMANDTRDRTINRR 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00094 1202 Gene3D - 119 289 - -
Aip01g00094 1202 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip01g00094 1202 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Aip01g00094 1202 Pfam Cation transport ATPase (P-type) 537 630 - -
Aip01g00094 1202 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Aip01g00094 1202 SFLD p-type atpase 410 920 IPR044492 -
Aip01g00094 1202 SUPERFAMILY Calcium ATPase, transduction domain A 143 286 IPR008250 -
Aip01g00094 1202 Pfam Phospholipid-translocating ATPase N-terminal 48 109 IPR032631 -
Aip01g00094 1202 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Aip01g00094 1202 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Aip01g00094 1202 SFLD Haloacid Dehalogenase 410 920 - -
Aip01g00094 1202 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 668 IPR023299 GO:0000166
Aip01g00094 1202 SUPERFAMILY HAD-like 422 924 IPR036412 -
Aip01g00094 1202 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1197 - -
Aip01g00094 1202 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 840 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip01g00094 1202 Gene3D - 705 909 IPR023214 -
Aip01g00094 1202 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1147 IPR023298 -
Aip01g00094 1202 CDD P-type_ATPase_APLT_Dnf-like 60 1029 - -
Aip01g00094 1202 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1197 - -
Aip01g00094 1202 Gene3D - 550 704 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00094 Aip-Chr1 988379 994835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00094 9 1195 Primary Pumps ATPases AT1G68710 72.578 0.0 1861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00094 K01530 - gmx:100781421 2053.48