Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00068 ATGGAGAAACTCAAATTACCTGTTAAGTGTGATCCTGATTCTTCTGGCAGTGATCATCCAGACTCATTTCCAATATTTAAACTTCCTGTGAGTGAAGATCTTAGAAGAGAGGAATACGGCGTGGGTTCTGTGCCGGCGATCGCACCCTCTAATTCTTCCGGCAATAGAGAAACTATGAACAAGTGGATGGCATTTTCCAGAGATTCTGGTTTCAACAATGATGGTAACTCTGCAATGAACAATCTTTCAGGGGCTAAAAGTGCAGCAAAAGTCAATGACTCCACGAATCATCGAACTTTAACCGAAGCAAGCATAGCTGAGAGAACTGCTGAATGGGGTCTTCCAATGAACTCAAGTAGTGTAAAGGCAATAGCAGAGAAAACAAGCTCCTCTTTTGATGGTGACAAAACCAAAAACTTATCAGATAGATTTGTTGAATCAACAAGGACATCCGGGGACTCGAACTATGGATCTGAATCATCATCAGGGGTGTTCCCAAGAGTCTCACAAGAGTTGAAAGAAGCGTTGGCGACGCTGCAACAAACTTTCGTTGTCTCGGATGCAACCAAGCCAGACTGTCCTATCATGTATGCCAGCAGTGGCTTTTTCAATATGACTGGTTATTCTTCAAAGGAGGTTATTGGAAGGAATTGTCGATTTCTTCAGGGGCCCGATACAGACATGAATGAAGTGGAGAAAATTCGGGATGCAACTAGAAATGGGAAAAGTTATTGTGGCAGGCTTTTAAACTACAAGAAAAATGGAACTCCATTCTGGAATCTTCTCACTATTACCCCCATTAAAGATGACAATGGCAACACTATCAAATTCATCGGAATGCAGGTTGAGGTGAGCAAGTACACAGAAGGATTGAGTGAAAAGGCGTTACGACCGAATGGATTACCTACATCGTTGATTCGTTATGATGCTCGTCAGAAGGAGAGAGCTTTAGGTTCCATCACTGAGGTTGTCCAAACTGTGAAGGATCCAAAATCCTCTAGTAAGCCTATGATTGAAGAAAATGCTACCAAGCATGAAGAGAAAGAGAAGTTTGATTTTGAATTTGTTTTGCCAAAGTCTGTTGAAGCTGGGAATACAAGTAAATTTAGCAAACAAATTCCTCCCAAGAATTCTGAAACTGATGCATCACGCTTGAGTTCTTATGAGGAGAGAAACAAGGCTTCAAGAAAATCTGCACGAGTTTCTTTAAAGGGTTTTAAAGGGAGATCAAGTTCTACTGGGAGAGATGAGGAGACACCCATCATTGAGCCAGAGGTATTGATGACCCAGGAAATAACCCGGACCGAAAGTTGGGAGCGCGCTGAAAGAGAGAGGGATATAAGGCAGGGAATAGATCTAGCAACCACATTGGAGCGGATAGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGATTGCCCAATTATATTTGCATCTGATAGCTTCCTTGAACTTACCGAATATACTCGAGAAGAAATTTTGGGAAGAAATTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAGCAACTGTCCAAAAGATTAGAGATGCCATCAGAGAGCAGAGGGAAATTACTGTTCAGTTGATCAATTATACTAAGAGTGGAAAGAAGTTCTGGAATTTATTTCACTTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGCGTTCAGTTAGATGGAAGTGATCATGTCGAACCCTTAAAAAATCGCCTGTCTGAGAATGCTGAGCTACAAAGTGCTAAGTTGGTAAAAGCCACTGCAGAAAATGTTGACGAAGCTGTTCGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTATGGGCAATTCATTCTCAACCTGTCTTTCCACTACCTCACAAGAAGGATAATCCTTCCTGGGTAGCAATAAAAAAGATTGCTGCAAGGGGTGAGAAAATCAGCCTGCATCATTTTTCGCCTATTAGGCCATTGGGTTGTGGAGACACTGGCAGTGTTCATCTGGTGGAACTCCAAGGTACCGACGAACTATATGCAATGAAGGCAATGGAAAAGTCTATAATGTTAAACCGTAACAAGGTTCACCGAGCATGTATCGAGAGAGAGATTATATCATTACTAGATCATCCTTTTCTTCCAACATTGTACACTTCATTTGAGACTTCCACCCATGTATGTTTGATTACTGACTTCTGTGCCGGTGGAGAGTTGTTTGCCTTGCTCGACAAGCAACCTATGAAGATTTTCAAAGAGGATTCAGCAAGATTTTATGCAGCAGAGGTTGTGATTGGTTTGGAATATCTGCACTGTTTAGGTATAATTTATCGAGATTTAAAGCCCGAAAATATATTACTTAACAAGGAAGGCCATGTTGTATTGACTGACTTTGATCTATCATTTATGACAAATTGTAAACCCCAGGTTGTTAAGCATCCTCCACCTAGCAATAGAAGAAGATCGCGAAGTCAACCACCTCCGACATTTGTTGCAGAGCCAGTTACACAATCAAATTCATTTGTTGGAACTGAAGAATACATAGCTCCTGAAATTATTACTGGAGCTGGGCATAGTAGTGCTATTGATTGGTGGACCCTTGGTATCTTGTTGTATGAGATGCTCTACGGCCGTACACCATTTCGAGGAAAGAATAGACAGAGGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCAAGCCTTGCAGCAAGGCAGTTGATCAATGCACTACTGCAAAGAGATCCGGCCAGTCGTCTAGGCTCAACCACCGGTGCCAATGAGATCAAACAACATCCATTCTTCCGTGGAATCAATTGGCCTTTAATCCGCAACATGAATCCACCTCCGTTAGAGGCTCCTCTAAAATTGATAGAAAAAGTTCCAGTGGCCAAGGATATAAAGTGGGAAGATGATGGTGTTCTTTCTACCTCAATTGATATGGATAATATTTTCTGA 2964 0.417 MEKLKLPVKCDPDSSGSDHPDSFPIFKLPVSEDLRREEYGVGSVPAIAPSNSSGNRETMNKWMAFSRDSGFNNDGNSAMNNLSGAKSAAKVNDSTNHRTLTEASIAERTAEWGLPMNSSSVKAIAEKTSSSFDGDKTKNLSDRFVESTRTSGDSNYGSESSSGVFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFNMTGYSSKEVIGRNCRFLQGPDTDMNEVEKIRDATRNGKSYCGRLLNYKKNGTPFWNLLTITPIKDDNGNTIKFIGMQVEVSKYTEGLSEKALRPNGLPTSLIRYDARQKERALGSITEVVQTVKDPKSSSKPMIEENATKHEEKEKFDFEFVLPKSVEAGNTSKFSKQIPPKNSETDASRLSSYEERNKASRKSARVSLKGFKGRSSSTGRDEETPIIEPEVLMTQEITRTESWERAERERDIRQGIDLATTLERIEKNFVISDPRLPDCPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSENAELQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPLPHKKDNPSWVAIKKIAARGEKISLHHFSPIRPLGCGDTGSVHLVELQGTDELYAMKAMEKSIMLNRNKVHRACIEREIISLLDHPFLPTLYTSFETSTHVCLITDFCAGGELFALLDKQPMKIFKEDSARFYAAEVVIGLEYLHCLGIIYRDLKPENILLNKEGHVVLTDFDLSFMTNCKPQVVKHPPPSNRRRSRSQPPPTFVAEPVTQSNSFVGTEEYIAPEIITGAGHSSAIDWWTLGILLYEMLYGRTPFRGKNRQRTFSNILHKDLTFPSSIPASLAARQLINALLQRDPASRLGSTTGANEIKQHPFFRGINWPLIRNMNPPPLEAPLKLIEKVPVAKDIKWEDDGVLSTSIDMDNIF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00068 987 Gene3D PAS domain 438 602 - -
Aip01g00068 987 MobiDBLite consensus disorder prediction 366 382 - -
Aip01g00068 987 Pfam PAS domain 472 564 IPR000014 -
Aip01g00068 987 Pfam PAS domain 189 285 IPR000014 -
Aip01g00068 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 771 783 IPR008271 GO:0004672|GO:0006468
Aip01g00068 987 ProSiteProfiles PAS repeat profile. 449 522 IPR000014 -
Aip01g00068 987 ProSiteProfiles PAC domain profile. 242 296 IPR000700 -
Aip01g00068 987 SMART pas_2 451 520 IPR000014 -
Aip01g00068 987 SMART pas_2 170 239 IPR000014 -
Aip01g00068 987 Coils Coil 573 593 - -
Aip01g00068 987 SUPERFAMILY Protein kinase-like (PK-like) 629 962 IPR011009 -
Aip01g00068 987 MobiDBLite consensus disorder prediction 366 420 - -
Aip01g00068 987 Pfam Protein kinase domain 653 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00068 987 TIGRFAM sensory_box: PAS domain S-box protein 476 566 IPR000014 -
Aip01g00068 987 TIGRFAM sensory_box: PAS domain S-box protein 194 285 IPR000014 -
Aip01g00068 987 SMART serkin_6 650 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00068 987 PANTHER FLIPPASE KINASE 1-RELATED 127 984 - -
Aip01g00068 987 CDD PAS 195 284 IPR000014 -
Aip01g00068 987 PANTHER BNAA02G07840D PROTEIN 127 984 - -
Aip01g00068 987 MobiDBLite consensus disorder prediction 383 397 - -
Aip01g00068 987 CDD STKc_phototropin_like 648 961 - -
Aip01g00068 987 ProSiteProfiles PAS repeat profile. 168 241 IPR000014 -
Aip01g00068 987 SMART pac_2 245 287 IPR001610 -
Aip01g00068 987 SMART pac_2 526 568 IPR001610 -
Aip01g00068 987 MobiDBLite consensus disorder prediction 805 829 - -
Aip01g00068 987 Gene3D PAS domain 182 350 - -
Aip01g00068 987 ProSitePatterns Protein kinases ATP-binding region signature. 656 679 IPR017441 GO:0005524
Aip01g00068 987 MobiDBLite consensus disorder prediction 1 16 - -
Aip01g00068 987 SUPERFAMILY PYP-like sensor domain (PAS domain) 468 564 IPR035965 -
Aip01g00068 987 SUPERFAMILY PYP-like sensor domain (PAS domain) 189 281 IPR035965 -
Aip01g00068 987 MobiDBLite consensus disorder prediction 1 24 - -
Aip01g00068 987 CDD PAS 476 564 IPR000014 -
Aip01g00068 987 ProSiteProfiles Protein kinase domain profile. 650 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00068 987 Gene3D Phosphorylase Kinase; domain 1 649 733 - -
Aip01g00068 987 Gene3D Transferase(Phosphotransferase) domain 1 734 952 - -
Aip01g00068 987 ProSiteProfiles PAC domain profile. 523 577 IPR000700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00068 Aip-Chr1 703224 713061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00068 103 984 AGC Kinase Gene Family AT5G58140 73.416 0.0 1313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip01g00068 Pkinase 1.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00068 K20715 - gmx:100820096 1530.38