Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00063 ATGAAAACTACCCTTATGGTGATACTAGTACTAGTACTAGCTTCAGCTACATTTCTTGTAATTGTTGCACTTTATGTGTTCTTATACTTGAAAAGATTATCATCAAGAGATGGAAGTGAGAGGAAGGATATAGAGAGCTCAGAACAGCAGAAACAGGAAGAAGAAGAAGAGGAGGTGGCTATGAAGGAGGACTTGATCATCTTCCATGGTGGTGAGGATTTGACAATTTGTGATATTTTGGATGCTCCTGGTGAGGTTATTGGGAAGTCCAATTATGGAACTTTGTATAAGGCTTTGCTTCAGAGGAGCAACAAGGTGAGGCTTTTGAGGTTTCTGAGGCCAGTTTGCACCACAAGAGGTGAAGATTTGGATGAGATGATTCAGTTTCTTGGAAGGTTGAGGCACCCCAATTTGGTGCCTCTTCTTGGATTCTACACAGGTCCAAGGGGTGAGAAGCTACTTGTTCATCCTTTCTATAGGAATGGAAATCTGACTCAATTCATTAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATGCAAAATATCCTACGGTATAGCCAAAGGATTAGAGCATCTTCACACTGGACTAGACAAACCAATCATCCATGGAAACCTCAAATCGAAAAACATCCTTTTGGATCGGTCTTACCAACCGTACATCTCAGATTCCAGCCTCCACCTTCTGCTGAATCCTACTGCCGGCCAAGAAATGCTCGAAAGCTCGGCTGCTCAAGGATACAAGCCACCAGAGCTCATCAAGATGAAGGATGCAAGTGAAGAGACTGATATATACAGCCTTGGTGTGATCTTCCTCGAATTGCTTTCGGGAAAGGAACCTATCAACGAGCATCCGACACCTGATGAGGATTTCTATCTTCCCAATTTCATGAGAAATGCTGTTCTTGCACATAGAACTGCTGATCTTTACCATCCAGCCATTCTCCTTAGAAACAGCAGAGATGACAAGAAGAATTCGGTCAGTGAAGAAAGCATTCTCAAGTTTTTCCAACTTGCAATGGCTTGTTGCTCCCCTTCACCTTCAGTTAGGCCTAACATAAAGCTAGTCCTTAGAAAGCTTGAAGAGATTATACACTAG 1104 0.4239 MKTTLMVILVLVLASATFLVIVALYVFLYLKRLSSRDGSERKDIESSEQQKQEEEEEEVAMKEDLIIFHGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRGEDLDEMIQFLGRLRHPNLVPLLGFYTGPRGEKLLVHPFYRNGNLTQFIRDGNGECYKWSNICKISYGIAKGLEHLHTGLDKPIIHGNLKSKNILLDRSYQPYISDSSLHLLLNPTAGQEMLESSAAQGYKPPELIKMKDASEETDIYSLGVIFLELLSGKEPINEHPTPDEDFYLPNFMRNAVLAHRTADLYHPAILLRNSRDDKKNSVSEESILKFFQLAMACCSPSPSVRPNIKLVLRKLEEIIH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00063 367 ProSiteProfiles Protein kinase domain profile. 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00063 367 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 365 - -
Aip01g00063 367 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Aip01g00063 367 Gene3D Phosphorylase Kinase; domain 1 44 158 - -
Aip01g00063 367 Coils Coil 44 64 - -
Aip01g00063 367 Gene3D Transferase(Phosphotransferase) domain 1 159 367 - -
Aip01g00063 367 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 4 365 - -
Aip01g00063 367 SUPERFAMILY Protein kinase-like (PK-like) 84 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00063 Aip-Chr1 654602 657719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00063 31 365 Carbohydrate Esterase AT5G61570 58.407 9.58e-137 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip01g00063 PK_Tyr_Ser-Thr 1.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00063 - - adu:107476750 702.975