Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00057 ATGGGCGCGTGCTTTTCCGCATCTAAAGTCGTTAGCGGCTCCAATACGACGTCGCATCACAACAAACACAAACACCAACGGCATCAGCATCACCAGCAGCAGAAGCAACGGCCTACGCACAAGCACGTGCCGTGCGGCAAGCGAACCGATTTCGGTTACGACAAAGACTTCGATGACCGTTACTCCCTTGGCAAGTTGTTAGGTCACGGTCAATTCGGTTACACCTATGTCGCAATTGACAAGGCCGATGGCCACCGCGTCGCCGTTAAGAGGCTCGATAAGGCAAAGATGGTTCTTCCTATAGCTGTGGAGGACGTCAAGCGAGAGGTCAAGATACTGAAAGCACTTGCTGGCCACGAGAATGTGGTTCAGTTCTACAATGCTTTTGAAGATGATTCCTATGTGTATATAGTTATGGAGTTGTGCGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGAACAGTCGGTATAGTGAAAAAGATGCCGCAGTGGTTGTCAGGCAGATGCTCAAGGTTGCTGCTGAGTGTCATCTACATGGTTTGGTACACCGTGACATGAAACCAGAGAACTTCCTTTTCAAATCAACCAAAGAAAACTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAACCTGGAAAAAAATTTCATGATATAGTTGGCAGTGCTTACTATGTTGCGCCTGAAGTTTTAAAACGCAAGTCAGGCCCTGAGTCAGATGTGTGGAGCATAGGTGTTATTACTTACATATTACTCTGTGGGAAACGTCCATTTTGGGATAAGACCGAGGATGGTATTTTCAAGGAGGTCTTACGTAACAAGCCTGATTTCCGCAGGAAACCATGGCCAACTATAAGCAGTGCAGCAAAGGATTTTGTGAAGAAATTGTTGGTAAAGGATCCTCGGGCAAGATTAACTGCTGCTCAGGCTTTGTCACATCCATGGGTTAGAGAAGGAGGAGAAGCATCGGAGATTCCTATTGATATATCAGTTCTGAGCAACATGCGCCAGTTTGTGAAGTATAGCCGGTTGAAACAATTTGCATTGAGGGCATTGGCGAGTACACTTAATGAAGAAGAGTTGGCTGATCTAAGAGATCAATTTGACGCGATTGATGTGGACAAAAATGGTTCAATTAGTCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCTACCTTGGAAGTTGAAAGAATCGCGCGTTCTAGAGATATTGCAAGCGGTGAGTATGCGTGATATTGTGCAGACAGTACACATAATCAGCCATAATTCAACTTTTAAGACATGGAGTTTCTTTGGTGATTGA 1320 0.4492 MGACFSASKVVSGSNTTSHHNKHKHQRHQHHQQQKQRPTHKHVPCGKRTDFGYDKDFDDRYSLGKLLGHGQFGYTYVAIDKADGHRVAVKRLDKAKMVLPIAVEDVKREVKILKALAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYSEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKENSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGKRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISSAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAVSMRDIVQTVHIISHNSTFKTWSFFGD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00057 439 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Aip01g00057 439 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Aip01g00057 439 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Aip01g00057 439 Gene3D Phosphorylase Kinase; domain 1 54 146 - -
Aip01g00057 439 MobiDBLite consensus disorder prediction 1 45 - -
Aip01g00057 439 Pfam Protein kinase domain 61 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00057 439 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 415 - -
Aip01g00057 439 Pfam EF-hand domain 368 395 IPR002048 GO:0005509
Aip01g00057 439 SMART efh_1 368 396 IPR002048 GO:0005509
Aip01g00057 439 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 16 19 415 - -
Aip01g00057 439 SUPERFAMILY EF-hand 350 413 IPR011992 -
Aip01g00057 439 Gene3D Transferase(Phosphotransferase) domain 1 147 328 - -
Aip01g00057 439 Gene3D - 347 361 - -
Aip01g00057 439 ProSiteProfiles Protein kinase domain profile. 61 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00057 439 MobiDBLite consensus disorder prediction 18 42 - -
Aip01g00057 439 SMART serkin_6 61 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00057 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Aip01g00057 439 SUPERFAMILY Protein kinase-like (PK-like) 58 335 IPR011009 -
Aip01g00057 439 CDD STKc_CAMK 60 320 - -
Aip01g00057 439 Gene3D - 337 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00057 Aip-Chr1 621054 626053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00057 1 413 EF-hand Containing Proteins AT5G66210 80.435 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip01g00057 Pkinase 1.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00057 K13412 - gmx:100798941 720.309