Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00055 ATGGGAATGTTCCTCCATTTGTTGGTGTCTTTGGGAATTTTGTTGGCTGAGATTCATGTCATTTCTTCTTATACTGATCCCCAAGATGCTGCTGTACTTAGATCTTTGAAGGATATATGGGTAAATACACCACCAAATTGGGATAAATCAGATGACCCTTGTGGAGCACCATGGGAAGGAGTTACATGCAACAAATCAAGGGTTACTTCATTGGGACTTTCAACCATGGGCCTCAAAGGTAAACTAAGTGGGGACATTGGTGGACTAACAGAACTTAGATCTTTGGACTTGTCATTCAACAAAGGTTTAAAAGGTTCCCTGTCTCCAGAGATAGGAGACTTAAGCAATCTGAATATTCTCATCTTGGCTGGTTGTAGCTTCAGTGGCAGCATTCCGGATGCATTGGGAAATCTTTCACAGCTATCCTTTCTGGCCTTAAACTCAAACAACTTCACTGGAAAAATACCACCTTCATTGGGTAAACTCTCCAAACTTTATTGGTTAGACTTGGCAGATAATCAACTCACAGGACCTATTCCAGTTTCAACCTCCACCACCCCTGGATTAGACCAACTTCTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTACCATTTCCCCCAAACTTTTCAGCTCTGACATGGTGCTCATACATGTATTATTTGATGGAAATGATTTATCTGGTGCTATACCAGAAACATTAGGACTAGTTCAGACACTTGAGGTTCTTCGGCTTGATAGAAATTCCCTGACAGGAGAGGTTCCTACGAATCTCAATAACCTTACAAACATCAATGAATTGAACTTAGCACACAATAATTTGACAGGTTCTTTGCCAGATTTAAGTCACATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCCTTTGATCCCTCTGAACCTCCAGTCTGGTTCTCATCTCTACCATCACTCACCACTCTTGTTATGGAGTTTGGATCCTTGGAAGGTCCTCTTCCATCAAAGCTCTTCAGCATTCCTCAAATTCAGCAAGTGAAACTGAGGAACAATGCATTGAACAATACATTAGACTTAGGTGACAACATTTGTCCACAATTGCAGCTTGTTGATCTTCAAGACAACCAGATTTCCTCAGTAATCCTCCGTTCGCAATACAAGAACACATTGATCCTTATAGGAAATCCAGTGTGCAGTGTTCTCTCAAACACAAACTACTGCCAACTTCAGCAGCAGCCTAAGCAGCCTTACTCGACAAGCTTGGCGAATTGCGCAGGCAAATCTTGTCCGCCGGATCAAAAGCTTAGCCCTCAAAGCTGTGAATGTGCATACCCTTATGAAGGGATGTTGTACTTCAGAGGACCCTTGTTTAGAGAACTCTCAAATGTTAACATTTTCCATGAACTTGAGATGAGTTTGTGGGTGAAGTTGGACCTAACACCTGGCTCAGTTTCTTTGCAAAACCCTTTCTTCAATGGTGATGATTATCTTCAAGTGCAACTAGCTTTGTTTCCTCCATCAGGACAATATTTCAATAGGACTGAAGTTCAAAGAATTGGGTTTGATTTGACCAACCAAACTTACAAGCCTCCTAAGGAGTTTGGACCTTATTACTTCATTGCATTCCCTTATGCTTTCCCAGATTCTAACAAAGGAAATTCTCTTAGCACTGGTGCTATTATTGGTATAGCAGTAGGCTCATCAGTTCTGTTTCTGAGCCTGATAGCTTTAGCAGTATATGCAATCCTGCAAAAGAAGCGCGCGGAGCGAGCCATAGGATTAAGCAGACCTTTTGCATCTTGGGCACCAAGTGGAAAGGATAGTGGAGGTGCACCACAATTAAAGGGTGCAAGATGGTTCTCATATGATGAACTGAAAAAGAGCACTAGTAATTTCTCTGAAAGCAATGAGTTAGGATTTGGTGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGAAAAATCGTCGCGATCAAGCGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCATCACAAGAACCTCGTTGGACTCGTCGGATTTTGCTTCGAACAAGGAGAACAAATGTTGGTCTATGAATTCATGCCTAATGGAACACTTAGAGAGAGTTTGTCAGGAAGATCTGACATTCATCTTGATTGGAAGAGGAGACTTCGAATCGCCCTTGGCTCGGCCAGAGGACTCGCTTACCTTCATGAACTTGCCAACCCTCCAATTATCCACAGAGATGTGAAATCCACTAACATCTTACTAGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGACTATCTAAGTTAGTATCAGACAGTGAGAAAGGACATGTTTCTACTCAGGTTAAAGGAACATTGGTAAGAAACATTTGCACTATCACTTATGTTGTTCAAAATCTTTGTTCTGATTTTATCTCAATAACTTGA 2451 0.4157 MGMFLHLLVSLGILLAEIHVISSYTDPQDAAVLRSLKDIWVNTPPNWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNKGLKGSLSPEIGDLSNLNILILAGCSFSGSIPDALGNLSQLSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGPIPVSTSTTPGLDQLLKAKHFHFNKNQLSGTISPKLFSSDMVLIHVLFDGNDLSGAIPETLGLVQTLEVLRLDRNSLTGEVPTNLNNLTNINELNLAHNNLTGSLPDLSHMDTLNYVDLSNNSFDPSEPPVWFSSLPSLTTLVMEFGSLEGPLPSKLFSIPQIQQVKLRNNALNNTLDLGDNICPQLQLVDLQDNQISSVILRSQYKNTLILIGNPVCSVLSNTNYCQLQQQPKQPYSTSLANCAGKSCPPDQKLSPQSCECAYPYEGMLYFRGPLFRELSNVNIFHELEMSLWVKLDLTPGSVSLQNPFFNGDDYLQVQLALFPPSGQYFNRTEVQRIGFDLTNQTYKPPKEFGPYYFIAFPYAFPDSNKGNSLSTGAIIGIAVGSSVLFLSLIALAVYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKSTSNFSESNELGFGGYGKVYKGVLPDGKIVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSDIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLVRNICTITYVVQNLCSDFISIT 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00055 816 ProSiteProfiles Protein kinase domain profile. 629 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00055 816 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Aip01g00055 816 Gene3D Ribonuclease Inhibitor 220 285 IPR032675 -
Aip01g00055 816 SMART serkin_6 629 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00055 816 ProSiteProfiles Leucine-rich repeat profile. 267 289 IPR001611 GO:0005515
Aip01g00055 816 Pfam Protein tyrosine and serine/threonine kinase 632 788 IPR001245 GO:0004672|GO:0006468
Aip01g00055 816 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Aip01g00055 816 Gene3D Phosphorylase Kinase; domain 1 603 704 - -
Aip01g00055 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 794 - -
Aip01g00055 816 Gene3D Transferase(Phosphotransferase) domain 1 705 803 - -
Aip01g00055 816 PANTHER LRR RECEPTOR-LIKE KINASE 5 794 - -
Aip01g00055 816 Gene3D Ribonuclease Inhibitor 26 219 IPR032675 -
Aip01g00055 816 SUPERFAMILY L domain-like 34 406 - -
Aip01g00055 816 Gene3D Ribonuclease Inhibitor 286 433 IPR032675 -
Aip01g00055 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Aip01g00055 816 SUPERFAMILY Protein kinase-like (PK-like) 610 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00055 Aip-Chr1 592631 599180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00055 7 794 Receptor kinase-like Gene Family AT1G79620 75.123 0.0 1255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Aip01g00055 PK_Tyr_Ser-Thr 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00055 - - gmx:100792249 1390.56