Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00049 ATGCTATCCTCATCTTTCTCTTCGCTGCGCCACGTCAGATCCCGGCCAACACTCGCTGCCGGAACCACCACTTCTCCGACGTCGGAGAATCAACAATCATCGAGTCTTTCTCTCCACGCAACAGCGTCGTTTTACGAGATCCTCGGGATCCCCGCCTCCGCGTCGATCCTCGAGATCAAGACTGCGTACCGCCGACTAGCCAGGGTTTGCCATCCCGACGCCGCGACTGTGATCGGCGGTCGGAACGTATCGTCGGACGAGTTCATGAAGATCCATGCTGCTTACTCCACGTTATCGGATCCTGAGAAGCGCGCCAGCTATGATAGGAGCTTGCATCAGCGACGGCGGATTCCACTGACGGCGGCGACGCCGGAGTCAAGGTTTCCCGGTTACGGTGGGCGAAGATGGGAAACGGATCAGTGCTGGTAG 429 0.5851 MLSSSFSSLRHVRSRPTLAAGTTTSPTSENQQSSSLSLHATASFYEILGIPASASILEIKTAYRRLARVCHPDAATVIGGRNVSSDEFMKIHAAYSTLSDPEKRASYDRSLHQRRRIPLTAATPESRFPGYGGRRWETDQCW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00049 142 MobiDBLite consensus disorder prediction 1 35 - -
Aip01g00049 142 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 20 142 - -
Aip01g00049 142 Gene3D DnaJ domain 25 119 IPR036869 -
Aip01g00049 142 ProSiteProfiles dnaJ domain profile. 43 111 IPR001623 -
Aip01g00049 142 Pfam DnaJ domain 44 108 IPR001623 -
Aip01g00049 142 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Aip01g00049 142 CDD DnaJ 44 100 IPR001623 -
Aip01g00049 142 SUPERFAMILY Chaperone J-domain 40 114 IPR036869 -
Aip01g00049 142 PRINTS DnaJ domain signature 45 63 IPR001623 -
Aip01g00049 142 PRINTS DnaJ domain signature 63 78 IPR001623 -
Aip01g00049 142 PRINTS DnaJ domain signature 83 103 IPR001623 -
Aip01g00049 142 PRINTS DnaJ domain signature 103 122 IPR001623 -
Aip01g00049 142 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 20 142 - -
Aip01g00049 142 SMART dnaj_3 42 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00049 Aip-Chr1 519363 520248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00049 45 113 C2H2 Transcription Factor Family AT1G74250 40.845 1.16e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00049 - - adu:107478883 276.174