Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00045 ATGGCAGAGTTACATGTGCAATTTCTATCTGCGGTGGCTTGGGAAGCTGGAAAGCCACTGGTGATAGAGGAAGTGGAGGTAGCCCCGCCACAGGCAGATGAGGTCCGTATCAAGATATTGTTCACCTCACTCTGCCACACTGATGTCTACTTCTGGGAAGCTAAGGGACAGACACCGGTGTTTCCTCGTATTCTTGGTCATGAAGCCGGCGGCATTGTTGAGAGTGTTGGTGAGGGTGTGACCGATCTCAAGCCCGGAGATCATGTTCTTCCGGTGTTCACAGGGGAGTGCAAGGAGTGTCAACATTGCAAATCAGAGGAAAGTAACATGTGTGATCTCTTAAGGATCAACACGGACCGTGGAGTGATGATCAGTGATGGCAAGTCAAGATTCTCAATCAACGGAAAGCCAATTTACCATTTTGTTGGAACCTCCACATTCAGTGAATACACTGTTGTTCATGTTGGCTGTGTTGCCAAGATTAATCCTGCTGCACCACTTGACAAAGTTTGTGTCCTCAGTTGTGGAATCTCAACAGGTCTTGGTGCTACTTTGAATGTTGCAAAACCAACCAAAGGTTCATCAGTGGCTATATTCGGATTGGGAGCTGTGGGGCTAGCTGCGGCCGAGGGTGCAAGACTAGCCGGTGCATCCAGGATCATTGGGGTTGACTTGAATTCTAAGAGATTTACTGAAGCTAAGAAGTTCGGAGTTACTGAGTTTGTGAATCCAAAAGATTATGACAAGCCTGTTCAAGAGGTGATTGCTGAAATGACTAATGGTGGTGTCGATCGGAGTGTTGAGTGTACCGGAAGTCTCAGTGCTATGATCTCTGCATTCGAATGCGTCCATGATGGATGGGGTGTTGCTGTGCTTGTTGGTGTGCCGAACAAAGATGATGCTTTCAAAACACATCCAATCAATCTTTTGAATGAGAGGACTCTAAAGGGTACATTCTTTGGTAACTATAAGCCACGTTCTGATCTCCCATCAGTGGTGGAAATGTACATGAACAAGGAACTTGAACTGGAGAAGTTTATCACACATGAAGTGCCATTCTCAGAAATCAACAAGGCCTTTGAATACATGCTTAAGGGAGAGAGCCTCCGTTGTATTATCCGCATGCCTGCATAA 1134 0.463 MAELHVQFLSAVAWEAGKPLVIEEVEVAPPQADEVRIKILFTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECQHCKSEESNMCDLLRINTDRGVMISDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARLAGASRIIGVDLNSKRFTEAKKFGVTEFVNPKDYDKPVQEVIAEMTNGGVDRSVECTGSLSAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPINLLNERTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHEVPFSEINKAFEYMLKGESLRCIIRMPA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00045 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 66 80 IPR002328 GO:0008270|GO:0016491
Aip01g00045 377 Gene3D - 16 367 - -
Aip01g00045 377 PANTHER ALCOHOL DEHYDROGENASE 1 10 375 - -
Aip01g00045 377 Pfam Zinc-binding dehydrogenase 203 333 IPR013149 -
Aip01g00045 377 CDD alcohol_DH_plants 11 374 - -
Aip01g00045 377 Gene3D - 180 318 - -
Aip01g00045 377 SUPERFAMILY GroES-like 7 183 IPR011032 -
Aip01g00045 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Aip01g00045 377 SUPERFAMILY GroES-like 325 374 IPR011032 -
Aip01g00045 377 Pfam Alcohol dehydrogenase GroES-like domain 33 158 IPR013154 -
Aip01g00045 377 PANTHER ALCOHOL DEHYDROGENASE 10 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00045 Aip-Chr1 474142 484039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00045 33 367 Monolignol Biosynthesis Gene Families AT1G72680 26.176 7.08e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00045 K18857 - gmx:100783318 701.049