Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00037 ATGGGTTCAATTGGAACCGAAAGCCCAAAAGTTGAGGTTGCCACAGTTGATGTAATTTCAACTAAGGGTCTTATCCAGAATGGCCATGTTTATCTAGATGTTAGGACTGTGGAAGAGTTCCAGAAAGGACATGTGGATGCAGATAAGATTATCAACATTCCATACATGTTTAATACACCACAGGGAAGGGTAAAGAACCTGGAGTTTTTGAAGGAGGTTTCATCTGCTTGTAAGAAAGAAGATCACATCATTGTGGGTTGCCAGAGTGGGGTGAGGTCTCTTTATGCAACTGCTGATCTTCTTGCTGAGGGTTATAAGGATGTGAATAACATGGGAGGAGGTTATTTGGACTGGATAAAGAATGAATTTCCAGTGAAAGCACCAAAAGTGAAAAATGATCTCTAA 405 0.4049 MGSIGTESPKVEVATVDVISTKGLIQNGHVYLDVRTVEEFQKGHVDADKIINIPYMFNTPQGRVKNLEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLAEGYKDVNNMGGGYLDWIKNEFPVKAPKVKNDL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00037 134 CDD RHOD 24 118 - -
Aip01g00037 134 Pfam Rhodanese-like domain 27 120 IPR001763 -
Aip01g00037 134 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 131 - -
Aip01g00037 134 SMART rhod_4 11 124 IPR001763 -
Aip01g00037 134 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
Aip01g00037 134 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 131 IPR044684 GO:0003824
Aip01g00037 134 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 14 125 IPR036873 -
Aip01g00037 134 Gene3D - 5 127 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00037 Aip-Chr1 361340 363474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00037 3 125 Sulfurtransferasese or Rhodanese AT5G66170 59.350 1.98e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00037 - K15692 gmx:100792251 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00395 05 4423702 4425390 Aip01g00037 01 361340 363474 PCT
Aip05g00349 05 3857572 3859359 Aip01g00037 01 361340 363474 PCT