Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00027 ATGAGGCCATCACTACTCTTGCAAAAGCTTCTTTTTCAATTGTTTCAAGCAATTCTTTGGTGTTGTTCTTCCATTCTCATCATTGCCATCATCATATTATTCCAACATGTTTCTGCTGAAAATCTACCAAACAATGAAACTGTGCCAGCAGTGATTGTGTTTGGAGATTCCATAGTTGATTCCGGCAACAACAATTATATCAGTACTATTGTCAAGTGCGATTTCTCACCATACGGAAGAGATTTTGGTGACGGAAATTATCCGACCGGAAGATTTAGCAACGGTTTAGTCCCATCAGACATTATTGCTGCAAGATTTGGAGTCAAGAAACTTTTACCACCTTACCTTGATCCGAATTTGCAACTTGAAGATCTCCTCACCGGAGTAAGCTTCGCCTCCGGCGGTGCCGGATATGATCCTCTAACATCCAAATTAATGTCTGTGATATCATTAACAGAACAACTAAACATGTTTAAGGAGTACATAAACAAGATTAAGGAAGCAGTTGGAGAAAACAGAACATCAATGATAGTGTCAAAGAGTATATACATAATTTGCATTGGAAGTGATGACATTGCCAACACTTATGTTCAGACACCATTTAGAAAAATTCAGTATGATATTCCATCATACACAGATTTTATGGCTTCTGAAGCCTCAAATTTCTTTCAGGAACTTTATGGATTAGGAGCAAGAAGGATTGGAGTGTTTGGTGTACCAGTTATAGGTTGTGTGCCCTCACAAAGAACAATTAGTGGAGGCATCCTTAGAGCATGTTCATATTCTACAAACCAAGCAGCAATACTCTTTAACTCAAAGCTCTCCAACCAAATGGATGCACTTCAAAAGAAGTTTCCAGATGCTAGATTTGTCTATCTTGATTCCTACAATCCATTCCTTGATATGCTTCAAAACCCTACAAAATATGGTTTTGCTGAGGTAGAGAAAGGATGCTGTGGCACAGGGAACATAGAAGTGAGCATATTGTGCAACCGTTACAGCCTTAACACATGTTCCAACGACTCTGATTACATTTTCTGGGATAGTTATCATCCTACTCAAAAGGCTTATTTTGTGCTTAGTTCTTTGATTCTTGATCACAAAATCAAAGACTTCTTTTGA 1122 0.3815 MRPSLLLQKLLFQLFQAILWCCSSILIIAIIILFQHVSAENLPNNETVPAVIVFGDSIVDSGNNNYISTIVKCDFSPYGRDFGDGNYPTGRFSNGLVPSDIIAARFGVKKLLPPYLDPNLQLEDLLTGVSFASGGAGYDPLTSKLMSVISLTEQLNMFKEYINKIKEAVGENRTSMIVSKSIYIICIGSDDIANTYVQTPFRKIQYDIPSYTDFMASEASNFFQELYGLGARRIGVFGVPVIGCVPSQRTISGGILRACSYSTNQAAILFNSKLSNQMDALQKKFPDARFVYLDSYNPFLDMLQNPTKYGFAEVEKGCCGTGNIEVSILCNRYSLNTCSNDSDYIFWDSYHPTQKAYFVLSSLILDHKIKDFF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00027 373 CDD SGNH_plant_lipase_like 49 366 IPR035669 -
Aip01g00027 373 Gene3D SGNH hydrolase 36 369 IPR036514 -
Aip01g00027 373 SUPERFAMILY SGNH hydrolase 50 366 - -
Aip01g00027 373 Pfam GDSL-like Lipase/Acylhydrolase 51 363 IPR001087 GO:0016788
Aip01g00027 373 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 372 - -
Aip01g00027 373 PANTHER GDSL ESTERASE/LIPASE EXL3 4 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00027 Aip-Chr1 296301 301369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00027 22 368 Pollen Coat Proteome AT1G75910 39.031 1.05e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00027 - - ahf:112723705 724.546