Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00025 ATGGTATTCGTCCTGCACTGTGACGACAACTATGCAAAACCTACTGGTCAGCTACCAATTGATGCCTTTGCACAAGCATGGGTACTTGCTGGGGATATCTCGGAAAAGTGTCCTATAGACAGAAGGCTCGAACTAGTGGATGAGAATGAGAAGCCATTGAATGCATCAATCCACCTGAGGCTGCAGTTTTCTAAAGCTAAAAAATGGCTAGGGCTTCCCACCAGATGCTTTCCACAGAGAATTGGATGTGAGGTAACTCTTTTCCAAGATGCTCATACCCGGGATGAATTTGTCCAGAGAAAAGCCGATGCCGGACTTGGGAAATACGAGTCCCACGGATGCTGGGAGGATATGTTTGATAAAATCAATGGAGCAAAACACTTCATATACATTACAGCCTGGTCTCTTGACACTAAGATAACCCTCATAAGGGATCCAAGGATGAATCCTGGAAGTGTCCAAACACTTGGTGAGCTGCTCAAGAAAAAAGAGAAAGATGGTGTAAGAGTTGTACTACTTCTTTGGAACGATGTAACAGCTGTTCGGTTATTTAAAAATGAAGGACTCATGGGTACTTGTGACAAAGAAACGGAACGGTATTTCAAAGGCACTGGTGTGGAGTGTGTTCTACGTACTCATGAGAAATGGATGTGTTCTCATCACGAGAAAGTGGTGATTGTGGACGCTCCATTGACCAATAATGCGAAGAGAAGATTAGTGAGTTTTATCGGGGGTTTAGATCTCTGCAAAGGAAGATTCGACACTCCATCACATCCACTTTTTAGCAGTTTGGGCCCGGACGGTGAGCACAGCAGGGATTTTCATCAACCCAACTTTGAAGGTACTGCAATCACAAAAGGAGGCCCTAGAGAACCGTGGCATGACGCGCACTGTCGCCTTGAAGGGCCTGTTGCATGGGATGTTTATAAAAACTTTGTGGAGAGCATCAGGAAGGAAGGTAAAGAGGACATACTTGTTCCAGATAAACAGGTTGAAGATGTCATGGGTGACCGTGGCATTGTGGAGAGCTGCAAGAAGGAAGGAAAAGAGGGCATACTTGTTCCACAGAAACAGGTTAAAGATGTCATAAGTGACCAACAAATAATTGAGCCTAATCATGAGACGTGGAATGCTCAGTTGTTTAGAGAAGCTGCTGAAACAAAAAAAGGTTTTCGAGGGAAGAATAAGAAGACAGATCGGAGCATTCACGATGCGTATATATATGCTATTAGAGCTGCCGAGCGCTTCATCTATATTGAGAACCAGTATTTTATAGGAAATAGTTCTGAAAAAAATGATGCTTCACATCAAATTGCAACGGAGCTTACACTTAAAATTGTTAGTAAGATTAAAGCCAAGGAAAGGTTCGCTGTGTATGTTGTCATTCCCATGTGGCCTGAGGGTATCCCAGAATGTTCCTTTGTTCGGAAAATGTTAGATTTGCAGAAAGGAACAATAGAAAAGATGTACAGGGACATTAATCAAGCAATCAAGGAAGCGGGAATTGATGAAGAACCTCAAAATTATTTGGCATTCTTCTGCCTTGGAAATCGAGAGGTGAAGAAGCAAGGAGAGTATGAACCTCCAGACAAGCCATCCAAAGGTTCCAGTTACCAGAAAGCCCAAGAGGCCAGGCGCTTCATGATTTATGTACATTCTAAGCTAATGATAGTTGATGATGAATACATAATCATTGGATCGGCCAACATCAACCAGAGATCCATGGATGGTGGTAGAGACACTGAGATTGGCATGGGAGCTTACCAACCCTACTATTTGGCTAGCGGGCCAAACGGTGCAACGGGCCAGGTGCATGATTTCCGCAGGTCCTTGTGGTTGGAGCATCTTGGCAAACATGAAAACACCTTCCTCAACCCTGAGAGTAAAGCATGTATTGAGAAGGTGAACCAGTTTGCTGAGGAGAATTGGAAATCATATTCCGATATATCTAGCGTTGACCTTCATGGCCACCTTCTTCGCTATCCTTATCACATTTCTGACGATGGAACCATCACAGAGCTTCCTGGATTTGAGTTCTTTCCGGACACTAATGCTGAGATTCTAGGAAAGGATGACATATACACGAGGCTTCCATTTATTCGGGATCTTCTTCTAGGTTGA 2121 0.4366 MVFVLHCDDNYAKPTGQLPIDAFAQAWVLAGDISEKCPIDRRLELVDENEKPLNASIHLRLQFSKAKKWLGLPTRCFPQRIGCEVTLFQDAHTRDEFVQRKADAGLGKYESHGCWEDMFDKINGAKHFIYITAWSLDTKITLIRDPRMNPGSVQTLGELLKKKEKDGVRVVLLLWNDVTAVRLFKNEGLMGTCDKETERYFKGTGVECVLRTHEKWMCSHHEKVVIVDAPLTNNAKRRLVSFIGGLDLCKGRFDTPSHPLFSSLGPDGEHSRDFHQPNFEGTAITKGGPREPWHDAHCRLEGPVAWDVYKNFVESIRKEGKEDILVPDKQVEDVMGDRGIVESCKKEGKEGILVPQKQVKDVISDQQIIEPNHETWNAQLFREAAETKKGFRGKNKKTDRSIHDAYIYAIRAAERFIYIENQYFIGNSSEKNDASHQIATELTLKIVSKIKAKERFAVYVVIPMWPEGIPECSFVRKMLDLQKGTIEKMYRDINQAIKEAGIDEEPQNYLAFFCLGNREVKKQGEYEPPDKPSKGSSYQKAQEARRFMIYVHSKLMIVDDEYIIIGSANINQRSMDGGRDTEIGMGAYQPYYLASGPNGATGQVHDFRRSLWLEHLGKHENTFLNPESKACIEKVNQFAEENWKSYSDISSVDLHGHLLRYPYHISDDGTITELPGFEFFPDTNAEILGKDDIYTRLPFIRDLLLG 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00025 706 Pfam Phospholipase D Active site motif 219 252 IPR001736 GO:0003824
Aip01g00025 706 Pfam Phospholipase D Active site motif 548 574 IPR001736 GO:0003824
Aip01g00025 706 SMART pld_4 547 574 IPR001736 GO:0003824
Aip01g00025 706 SMART pld_4 216 252 IPR001736 GO:0003824
Aip01g00025 706 Pfam Phospholipase D C terminal 620 690 IPR024632 -
Aip01g00025 706 PANTHER PHOSPHOLIPASE D ALPHA 3 24 693 - -
Aip01g00025 706 Gene3D Endonuclease Chain A 346 610 - -
Aip01g00025 706 Gene3D Endonuclease Chain A 95 336 - -
Aip01g00025 706 SUPERFAMILY Phospholipase D/nuclease 367 632 - -
Aip01g00025 706 PANTHER PHOSPHOLIPASE D 24 693 IPR015679 -
Aip01g00025 706 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 547 574 IPR001736 GO:0003824
Aip01g00025 706 SUPERFAMILY Phospholipase D/nuclease 76 326 - -
Aip01g00025 706 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 220 252 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00025 Aip-Chr1 272121 274720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00025 12 689 Phospholipase D Gene Family (Wang group) AT1G52570 50.068 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00025 K01115 - gmx:100786410 692.189