Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00017 ATGAACGCGCAAAAAGCTAGGCGATTCATGATTTATGTGCATTCGAAGATGATGATAGTGGATGATAAATACATAATCATTGGATCTGCTAATATGAACGAGAGATCAATGAATGGTGGAAGAGACACCGAAATTGCTATGGGAGCTTATCAACCCATTGTGACTAAGCCTGGTGGTGATGCTACTGCAACTGCAACGGGTGAGATCCGTGATTTTCGCAAATCACTTTGGTACGAGCACCTTAACGTGCAAGATCACAGATTCCTCGAGCCTGAAAAAGAAGATTGCATTAGAAGGGTGAACGAACTTGCTCAAGGAAATTGGAACGCGTATTCTTCTTCAACTGTGACTGACCTTTCTGGTCACCTGCTCTGCTATCCTGTTAAAATTTCTGCCAATAATGGAACTATCACAGAGCTTCCAGGATCTCTTGGTTTCTTTCCGGACACTAAGGCCCGTGTTCTACCTGATAAAAGCCCTGGTGGACTGATAAATGAGAAGTGCTAG 507 0.4339 MNAQKARRFMIYVHSKMMIVDDKYIIIGSANMNERSMNGGRDTEIAMGAYQPIVTKPGGDATATATGEIRDFRKSLWYEHLNVQDHRFLEPEKEDCIRRVNELAQGNWNAYSSSTVTDLSGHLLCYPVKISANNGTITELPGSLGFFPDTKARVLPDKSPGGLINEKC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00017 168 SMART pld_4 9 36 IPR001736 GO:0003824
Aip01g00017 168 Pfam Phospholipase D C terminal 85 155 IPR024632 -
Aip01g00017 168 PANTHER PHOSPHOLIPASE D 1 158 IPR015679 -
Aip01g00017 168 Gene3D Endonuclease Chain A 1 79 - -
Aip01g00017 168 SUPERFAMILY Phospholipase D/nuclease 6 84 - -
Aip01g00017 168 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 9 36 IPR001736 GO:0003824
Aip01g00017 168 PANTHER PHOSPHOLIPASE D ALPHA 2 1 158 - -
Aip01g00017 168 Pfam Phospholipase D Active site motif 10 36 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00017 Aip-Chr1 213856 214670 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00017 1 159 Phospholipase D Gene Family (Wang group) AT1G52570 58.750 7.73e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00017 K01115 - ahf:112796776 259.996