Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g3029 ATGAAACAGGAGATAAATCATAATCAGCATCAAGGGGAGTGTTCTTATTCTTCATCTTCTTACAATATGATGCATCAACACAACATGATGATGATGAGTGATGAAATGATCTTTGGAGGAGGAAGAGGCTTCATCAATAGCAACAATATGAACATGATGAACATGAATATGAACATGTTGTCTTCTTCTGATCAAATGATGCATCAGCAGCCGCAGCCGCAGCAGCAGCAACCATGGTCCATGCCATCAATACAAGAACTACCCTTCAACAACCATGAATCGTTTATTGTGCCTCCACAACAACAACAACAAGCTTCACCATATGCAAGCTTCTTCAACAGTAGAAGGGTTCATCCATCATCATCATCTTCCATGCAGTTTGCAGCAGCATATCATCATCATGAGGGTGCTACTTCATCATTTGATCTGCAAGCTGAACTGAGCAAGATGACTGCTCAGGAAATCATGGAGGCTAAGGCTCTTGCTGCTTCCAAAAGCCACAGTGAAGCTGAGAGGAGGCGTAGAGAGAGGATCAATAATCATCTTTCTAAGCTCAGAAGCTTGTTGCCTAGCACCACCAAAACAGATAAAGCATCATTGCTAGCAGAAGTGATTCAACATGTGAAGGAACTGAAACGGCAAACATCAATGATCGCAGAGACGAGTTCAGTTCCAACAGAATCCGACGAGCTCACTGTGGACGATGCATCTGATGAAGATGGCAAATTGGTAATTAAAGCCTCTTTGTGCTGCGAAGATAGGTCCGATCTCTTGCCTGAACTCATCAAAACCTTGAAATCAATGAAGCTTCGAACCCTCAAAGCAGATATCACTACACTCGGTGGCCGTGTCAAGAACGTCTTGTTCATCACCGCTGAACAAGATTACTACTCATCATCAACCGCCAATGAGGATCATCATCATCAACATGACCATAATAATAGTTACCAATACTGCATTAGTTCAATACAGGAAGCTTTGAAGGCAGTTATGGAGAAAAGTAATGGCGGTGTTGGGAATGAGCCTGGTTCTTCTTCTGCAAGTGTTAAGAGACAAAGGACTAATATCATATCCTCCATATCTTAG 1086 0.4236 MKQEINHNQHQGECSYSSSSYNMMHQHNMMMMSDEMIFGGGRGFINSNNMNMMNMNMNMLSSSDQMMHQQPQPQQQQPWSMPSIQELPFNNHESFIVPPQQQQQASPYASFFNSRRVHPSSSSSMQFAAAYHHHEGATSSFDLQAELSKMTAQEIMEAKALAASKSHSEAERRRRERINNHLSKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSMIAETSSVPTESDELTVDDASDEDGKLVIKASLCCEDRSDLLPELIKTLKSMKLRTLKADITTLGGRVKNVLFITAEQDYYSSSTANEDHHHQHDHNNSYQYCISSIQEALKAVMEKSNGGVGNEPGSSSASVKRQRTNIISSIS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g3029 361 Pfam Helix-loop-helix DNA-binding domain 165 211 IPR011598 GO:0046983
Ahy9g3029 361 SMART finulus 168 217 IPR011598 GO:0046983
Ahy9g3029 361 MobiDBLite consensus disorder prediction 333 361 - -
Ahy9g3029 361 PANTHER TRANSCRIPTION FACTOR BHLH30 83 360 IPR045847 GO:0003700|GO:0006355
Ahy9g3029 361 MobiDBLite consensus disorder prediction 338 361 - -
Ahy9g3029 361 Gene3D - 156 221 IPR036638 GO:0046983
Ahy9g3029 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Ahy9g3029 361 PANTHER TRANSCRIPTION FACTOR BHLH30 83 360 - -
Ahy9g3029 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 220 IPR036638 GO:0046983
Ahy9g3029 361 CDD bHLH_AtAIG1_like 157 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g3029 Ahy-Chr9 120243831 120246581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g3029 108 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 60.294 3.16e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g3029 HLH 1.90E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g3029 - - mnt:21405749 316.235