Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g3019 ATGATGCCCCCAGAGCAAGAAAGCAATATTGCACCCAACATTAGTCCTGGTGATGCTGAACCGGTGGAGGGTTGTGCTGCCACCAATAATAACAAAGTTATACCAAGTTTGGATAATAATAATAATAATAATAACAATGATGCCATTCATGATGAACACCATCAACCAACAACAGCAGCAGCAGCAACAGCAACAAGATTTTCTATTCTTCAACAATCTTTGCGTCCTATTACTCTAAAATTTGAGGACGTATCATACAGCATAAGCTTCCCAAGGAAAAAGAAGAACGGCTGCTTCATGCATCAAGAGCCAAAGCACAGAAGGAAAATACTCAGCGGCGTCACCGGCGTCGCTCGTCCCGGGGAGCTAACGGCAATGCTGGGGCCGTCCGGGAGCGGCAAGACAACTCTCTTGACCGCGCTCGCCGGTCGCCTCGTCGGAAAAGTTTCCGGCTCCATAACTTACAACGGCCGCCACGACACCGCCGCCGTGAAGCGCAAGATAGGCTTCGTCTCCCAAGACGACGTACTCTACCCTCACCTGACCGTCCAAGAAACCCTAAATTACGCCGCCATGCTGAGGCTCCCGAAGACGCTCACCAAGGAAGAGAAGCTTCAGCATGCAGACGCGATTATCGCGGAACTCGGCCTCACGCGGTGCCGGAACAGTCCCGTCGGCGGCGGAGTGTCGATTATCCGGGGAATCTCCGGAGGAGAGAGGAAAAGAGTGAGTATAGGTCTTGAGATGCTGATAAACCCTAGTTTGTTGTTTCTCGACGAGCCTACGTCCGGGCTGGACTCCACGACGGCTCAGCTGATCGTGTCGGTGGTGCGAGGGCTCGCCCGCGGCGGCCGGACGGTGGTGACGACGATTCACCAGCCGTCGAGCCGGCTTTACAGGATGTTTGATAAGGTGGTGGTGCTTAGTGACGGGCACCCGATTTATTCCGGTCAATCGGGTCGGGTCATGGAGTATCTTGAATCCATCGGGTATGCGCCAGCTTTCAACTTCGTCAACCCTGCTGATTTCCTTCTTGACCTTGCAAATGGCATAGTTGCTGATGTCAAACATGAGGATAATGTTGAACATCACGAGGATCAAGCATCAATCAAACAGTCCCTAATTTCATCCTACAAGAAGAACTTGTATCCTGCTCTTAAAGAAGAGATTCAACGAAATAATATTGACTCGGTAATATCATCAGGAACACCAAGAAGTTCTGATAATCAATGGAACACAACATGGTGGGAGCAATTGAAGGTGTTACTTAAGAGGGGTTTACAAGAGAGAAGGCATGAATCCTTTTCTGGCCTTCGAATCTTCCAAGTTTTGTCTGTATCCATTCTCTCAGGGCTTCTTTGGTGGCACTGTGATCACTCACACATACAAGATCAGGTTGGACTCCTTTTCTTCTTCTCAATTTTCTGGGGATTCTTCCCTCTCTTCAATGCTATCTTTGCATTTCCTCTGGAGAGGCCAATGCTTGTGAAAGAAAGATCATCAGGAATGTACCATCTGTCCTCATACTACGTGGCACGAATGCTCGGAGACTTGCCAATGGAGCTTGTCCTCCCTACAATCTTTGTAAGCATCAGCTACTGGATGGGAGGACTAAAGCCTTCAGTAGTGACATTTGTGCTAACCCTCTTGATCATGCTTTTCAATGTCCTTGTATCCCAAGGAATAGGCCTAGCACTCGGCGCAATCCTCATGGATGTGAAGCAAGCCACGACTCTAGCCTCAGTGACCATGCTGGTGTTTCTCTTGGCCGGCGGCTACTACATTCAACATATGCCCCCCTTCATAGAATGGTTGAAGTATGTCTCCTTCAGTCACTACTGCTATAAGCTCCTTGTAGGAGTTCAGTATCCAGAAAATGATGTGTATGATTGTGGACATGGCTTGCTTTGTAGAGTAAGAGACTTTCCTGCTATAAAGTGTTTGGGGATTGAAAATTTGTGGGAAGATGTTGCAACATTGACTCTGATGTTAATTGGATACAGAGTTGTCGCATATTTAGCTTTGAGGATGGGGCAGCCTCACTGA 2046 0.4834 MMPPEQESNIAPNISPGDAEPVEGCAATNNNKVIPSLDNNNNNNNNDAIHDEHHQPTTAAAATATRFSILQQSLRPITLKFEDVSYSISFPRKKKNGCFMHQEPKHRRKILSGVTGVARPGELTAMLGPSGSGKTTLLTALAGRLVGKVSGSITYNGRHDTAAVKRKIGFVSQDDVLYPHLTVQETLNYAAMLRLPKTLTKEEKLQHADAIIAELGLTRCRNSPVGGGVSIIRGISGGERKRVSIGLEMLINPSLLFLDEPTSGLDSTTAQLIVSVVRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGHPIYSGQSGRVMEYLESIGYAPAFNFVNPADFLLDLANGIVADVKHEDNVEHHEDQASIKQSLISSYKKNLYPALKEEIQRNNIDSVISSGTPRSSDNQWNTTWWEQLKVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHCDHSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLVKERSSGMYHLSSYYVARMLGDLPMELVLPTIFVSISYWMGGLKPSVVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHMPPFIEWLKYVSFSHYCYKLLVGVQYPENDVYDCGHGLLCRVRDFPAIKCLGIENLWEDVATLTLMLIGYRVVAYLALRMGQPH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g3019 681 Gene3D - 71 332 IPR027417 -
Ahy9g3019 681 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Ahy9g3019 681 Pfam ABC transporter 114 263 IPR003439 GO:0005524
Ahy9g3019 681 MobiDBLite consensus disorder prediction 1 60 - -
Ahy9g3019 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 335 IPR003439 GO:0005524
Ahy9g3019 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 327 IPR027417 -
Ahy9g3019 681 MobiDBLite consensus disorder prediction 29 46 - -
Ahy9g3019 681 ProSitePatterns ABC transporters family signature. 235 249 IPR017871 GO:0005524
Ahy9g3019 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 47 678 - -
Ahy9g3019 681 CDD ABCG_EPDR 76 317 - -
Ahy9g3019 681 SMART AAA_5 120 312 IPR003593 -
Ahy9g3019 681 Pfam ABC-2 type transporter 292 379 IPR043926 GO:0140359
Ahy9g3019 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g3019 Ahy-Chr9 120012387 120016951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g3019 118 324 Calmodulin-binding Proteins AT2G36910 26.512 8.38e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g3019 K05681 - gmx:100792991 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2496 19 142861602 142866380 Ahy9g3019 9 120012387 120016951 hybridization