Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g3013 ATGGCTGCTGCTTCATCAACACCATTCTTGGGAGTCAGAGAAGAAAGTCAAAGCCAGATTGCACATCAATCCTCCATAGCTGCCTCCTCAGCTTCTACTCCTCCCGCTGTTCCTCAGAAGAAACGAAGGAATCAGCCTGGAACACCAAATCCAGATGCAGAAGTGATAGCACTATCGCCAAAGACACTAATGGCAACAAACAGGTTCATATGCGAGGTATGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTACACAGAAGAGGACACAACCTACCATGGAAGCTGAAGCAGAAGACGAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGCCCCGAACCCACGTGTGTCCACCACGACCCTTCCAGGGCCTTGGGAGACCTCACTGGGATCAAGAAGCATTACTCTCGCAAGCATGGCGAGAAGAAGTGGAAGTGTGACAAGTGTTCTAAGAAATATGCTGTTCAATCCGATTGGAAGGCTCATTCTAAAACTTGCGGAACCAGAGAGTATAGATGCGATTGTGGCACTCTCTTCTCTAGACGTGACAGTTTCATCACTCATAGGGCCTTCTGTGATGCCCTAGCTCAAGAAAGTGCAAGGCACCCAAATGGCACCATGAACCCTTTGGGAGGGACACATTTGTATGCCACAAACACAAACCACATGACCTTAGGCCTCTCCCAATTAGGCACCCAAATCTCCCAATTCCAGAATCACCAAAGTGGCGCCACTCACGGCAGCGGCGGCGGCGGCATCCTCCGTCTCGGAAGCGCCGGGGCAGCCAAATTCGAGCACTTAATCCCGCCTTTAAGCCATCAGTCTTCATCATTTGGACACTCACCCCAATCATCACTCACTAATCCCTCACCTTTCTTCATCAATGACCCAAATCAAGCATTTGAAGACAACAACCAAACTCATCAACAAGGTTCATTATTCTCAAGCAAGCAATTACATGGTCTAATGCAACTTCCTGATCTTCAAGGAAACACCACCAACACCAACTCTAATAATTCTTCCAATCTTTTCAACCTTAGCTTCTTCCCAAACAACAACAATAGCAGTGGAACCATCATCCCTGACCAATTCAATAGTAACCAACAAGGAACAACAACATCAACACTCTACGGTGACCAAGTTGGTTCAGGTTTGTCTTCACTCTTTGGAAATTCATCTTCATTGCAACATGAGAACGTGTCCCCTCATATGTCAGCCACTGCATTGCTTCAGAAAGCTGCACAAATGGGTCCAACTACCACCACCAACAATAATAATGGTTCTTCTATCCTTAGGGGAATGTGTAGTAGTTCCTCAAACAAATCCGAAAGGGAACTTGTTGTCTCTGATCATGTTGCATTTGGAAGTGATCAAAGAAGATCAAGCATGGAAAATGATCATCACCACCAGCAACACCTTCATGGGTTGATGAACTCCATTGCCAGTAATGTAGGAAACACTACTACTAGTTCCATATTTGACAATGTGCATCAAGGGAATGATGATAACAACAACAACCTCAGTCATCATCATCATCATCATCATCATCATCATCAGTTTCATCAGAGCCTACAGGATTCTAGTAATACCAATAAGCTTCCTCAGAATCATCTTGGGGTCAGTTTTGGAGGGTCTGATAAGTTGACATTGGATTTTCTTGGAGTTGGAGGAATGGTAAGAAACATCAACACTGGTGCAACAACACATGCATTTTCACAAACACATAGAGAGCAACAACAACAAGGAATGATGAATACCTTGAGTTCTTTGGATTCGGACCTGAAATCAGCACAATCAGCCACACCAAGCCACCGTTTTTGA 1824 0.4496 MAAASSTPFLGVREESQSQIAHQSSIAASSASTPPAVPQKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARHPNGTMNPLGGTHLYATNTNHMTLGLSQLGTQISQFQNHQSGATHGSGGGGILRLGSAGAAKFEHLIPPLSHQSSSFGHSPQSSLTNPSPFFINDPNQAFEDNNQTHQQGSLFSSKQLHGLMQLPDLQGNTTNTNSNNSSNLFNLSFFPNNNNSSGTIIPDQFNSNQQGTTTSTLYGDQVGSGLSSLFGNSSSLQHENVSPHMSATALLQKAAQMGPTTTTNNNNGSSILRGMCSSSSNKSERELVVSDHVAFGSDQRRSSMENDHHHQQHLHGLMNSIASNVGNTTTSSIFDNVHQGNDDNNNNLSHHHHHHHHHHQFHQSLQDSSNTNKLPQNHLGVSFGGSDKLTLDFLGVGGMVRNINTGATTHAFSQTHREQQQQGMMNTLSSLDSDLKSAQSATPSHRF* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g3013 607 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 2 570 - -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 489 539 - -
Ahy9g3013 607 Gene3D Classic Zinc Finger 123 202 - -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 524 539 - -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 274 312 - -
Ahy9g3013 607 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Ahy9g3013 607 Gene3D Classic Zinc Finger 48 117 - -
Ahy9g3013 607 Pfam Zinc-finger double-stranded RNA-binding 69 91 IPR022755 -
Ahy9g3013 607 SMART c2h2final6 145 165 IPR013087 -
Ahy9g3013 607 SMART c2h2final6 110 140 IPR013087 -
Ahy9g3013 607 SMART c2h2final6 69 91 IPR013087 -
Ahy9g3013 607 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 1 53 - -
Ahy9g3013 607 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 570 - -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 489 504 - -
Ahy9g3013 607 SUPERFAMILY beta-beta-alpha zinc fingers 68 165 IPR036236 -
Ahy9g3013 607 MobiDBLite consensus disorder prediction 10 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g3013 Ahy-Chr9 119875991 119881353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g3013 64 564 C2H2 Transcription Factor Family AT2G02080 45.580 3.69e-117 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy9g3013 zf-C2H2_jaz 3.80E-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g3013 K25870 - gmx:100780268 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2505 19 143056731 143061973 Ahy9g3013 9 119875991 119881353 hybridization