Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2953 ATGGGTAATGTTGAAATCCCCAATTGGCTCAAAGTGTTGCCACTGGCACCTGAATTTCGACCTACTGATACCGAATTCGCCGACCCGATTGCTTATATTTCAAAGATTGAGAAGGAAGCTAGCCACTATGGGATATGTAAGATTATACCACCATTGCCCAAGCCTTCAAAAAAGTACGTGTTTTCTAATTTGAATAAATCCCTCTTGAAGGCCTCTGAATTGGGTCCAGAGAGCGATTCTCTAGGTTGTTGTAATTCTTCGAGAACGGATTCTAGGGATGTTGGTAGTAATGATAGGTTGTTGAGGGCTGTCTTTACTACAAGGCAGCAAGAACTAGGGCAGAATGTGAAGAAAACCAGCAAAGGGAATATTCAGAATCCACTGCCAGGTGGTCAAAAACAAGTGTGGCAGAGTGGGGAAGTTTATACACTTGATCAGTTTGAGTCGAAATCGAAGTCCTTCGCTAAAAGTGTGCTGGCTACGGTGAAGGAAGTTTCTCCACTGGTTATAGAGGCTATGTTTTGGAAGGCAACATCAGAGAAGCCTATATATATTGAATATGCCAATGATGTGCCTGGGTCTGCTTTTGGGGAATCACAGGGTCAATTTCTTTATAGTCATAGAAGACGAAGAAAAAGGACTTATTATAAGAGTAGGCCACATAGCTCTGATTCTAAACAAACTGAAATGGATGGCATAGGAGATACCCAAATTGATGAGAATAAGGGTGCTTCTGCCAAAACTCATGCAGAACAATGTGTACAGTCCCAAACAGCTAGTACTGTGACACTTGCATCAAACGAAGTTTCACAATCTTCTAGGGAAAAGGGTTCAGATGCTGCTGATGATGATATGGAAGGCACTGCTGGTTGGAAGCTTTCAAACAGTCCATGGAACTTGCAAGTTATTGCACGCTCATCTGGCTCGCTAACACGTTTCATGCCCGATGATATTCCTGGTGTTACTTCACCTATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTGGAGGATCATGAGCTTCACAGCTTGAATTTCCTTCACACTGGCTCTGCAAAGACTTGGTATGCTGTTCCTGGAGAATATGCCTTTGCTTTTGAGGATGTCATCCGCTCTAAGGCATATGGTAGTAGTGTTGATCATTTAGCTGCTTTGAAACTTTTAGGTGAGAAAACAACTCTTATATCACCTGAAGTAGTTGTTGCATCTGGGATTCCTTGTTGCAGGTTAATACAGAATCCTGGTGAATTTGTTGTGACTTTTCCAAGGGCTTACCATGTTGGATTCAGCCATGGTTTTAACTGTGGGGAGGCTGCTAACTTTGGAACTCCGCAGTGGCTTACCGTAGCTAAGGAAGCTGCTGTGCGTAGAGCTGCTATGAATTATCTTCCAATGCTCTCGCATCAGCAACTGCTTTACTTGCTGACCATGTCTTTTATTTCTAGAGTACCAAGAACATTATTACCTGGTGTGCGTAGTTCTCGTCTAAGAGACCGTCAGAAGGAAGAAAGAGAGTTTTTAGTAAAAAAGGCTTTTATAGAAGATATGCTGCAGGAAAACAAACTTCTATCCACTCTTCTTGGAAAGGAAGCAACTAAACAAGCTGTTTTATGGAATGCCGATTTACTACTAGGTTCTAGCAAAGATTGTTCATTACCTGAAGTTTCTGCTGCTGAAACGGCCATGGTGGACATGCCAAATACTAGTTTGGGAGATAAGATTGGTCATAGTCTGATTGACGAGATGAGTTTGTATATGGAGAATCTGAATGGTCTATATCTTGATTGTGATGATCTTCCATCTCACTTCCAAACTGATTCAGGGGCATTGGCTTGTGTGGGCTGTGGAATCCTTGGTTTTCCATTTATGACTGTGGTACAACCATCTGAGAAATGGATGGAAACTCTTCCTGGTCAAGATTGCACTCTCAACTCTACTGCTCATAGCTCAGTCTCTGGTAATGACTCTGTTTCTGAACTTCCTGCTGCAAAGGAGTCACCAGATCAATCATTTGGTTGTACTAATTGTTGGAACATGGCTAATAAATTTTTGAGGCCTCGGATTTTCTGCCTGGAACATGCAGTTCAGATAGTGGAGATGTTGCAGTGCAAAGGCGGGGCCAATGTGCTTATTATATGCCATTCAGACTATGAGAAGATAAAGGCACATGCCAGGGCAGTTGCAGAAGAGACACACATTGCATTTGATTATAACGATGTTCCATTAGATACTGCATCCCCAGAAAATTTGACTCTCATTGACCTGGCAATTGATGGTGAGGAATATGATGAATGCGAAGACTGGACATCTAACTTGGGAATTAATCTGCACCATTGTGTTAATGCAAGAAATAAATCTCCATCTAAACAAGCTATTTGGACCCTGGCATTGGGCATGCTGTTCTCTGATAAAGGTCCTGGTTCACAATTTATAGCTATAAATTGGCAGTCTCGAAGAGCTCGCTCCAAAAGATTACATCATCTAGCTCCAACGAAACCTAAACCCAGTATTGCCATTCAGAAAAGGGAAGATGATGAGTTGGAGGGAAGAATAGATGATTCTATTGCCAGAAAGAAGTTAATTCAATATTCAAGAAGGAAGTTCAAGTCCAACCAAAATTCTTATTCTGGATCAAGCATTGTCCATGAATTGCAAGAGAAGTCCAAGATTGTGTCGGCTGATTCGAGTGGGGATCATTATAAATGTGGTTCTAAAGGGGAGCTTGATGCTGATAATTTCAAAAGCGATTGTGCTTTGCCAAATGCATCTGCTTCCATTGCAGTGTCTCCAGTGGATCATGAAATTCGGGGTACTGAATTTCCCAATAGCATTAGCTTGAACGCTGATACCTCACAAACTTCTAATTCCTCTCCAGGTCATTGTTTCGTGAATGAAAATGTTGAAACTGAGATTGAGAATCACACCGTGCAGGATTTAGGAATAGATGGAGAAAAAGATGATCAATCTAAGAATCATCATGATACTGGTGTTTTGGAAACGAGTGGCAAGGAGGAGCTTGGGTGTCAGGACAATAAATATTCTAGATCACTTGTGAATTCGACGGACAGAAATGTCGACGTTGGTTGTAAATGTGATAGCTTGGATTTGGATGAAGAATTGCATCGAGAGAATCCATCTGCCTGCAAAAGCAACAATGAAGAAGCTGCTTCATCTAGTGTCTCATTGGCAAATCAACCTATACTTGCCTCTATAGATGACGCATTAACTGAATTGGCTTCGGAGTCTGCAAAGCAGTGCAAGGTCCAAGATAATAATACAATTTACGAGGAACCTGTTTCTAGTAATGTTGCAAGAGGCAATACTAGAAGTGAAGCCATCTTGGAGTTAGGATGTTCTGAAGTTGCAGTAGAAACTTGTTCTCAAGAAGAAAATGAATTGAAAATCCAGCCAAATAATAGAATTAATGAGGAAGATAACTCGAGTCCCAAGACACCATTAAAGGAAGATATTAATGGAAGTGAAGATAAATTGTCACAAGATATGATGACAGAGCAGGAAAGCTGTAAGTTGAGTAATCCGGTTCCCAGATCAAATGCTCGGAAGAAAAGAAAGACGGAACTGGACCAGATAACAGAGAATCAATTCAGCTGCAACAACTTTATTCGAAGTCCGTGTGAAGGTCTGAGGCCAAGAGCTACGAAGATTGCCCCTGAGAAAAGTGAGGGAGATGCCGACCAAGATGACAAGGAGAATCCGAAGGCTAGAAGGGACCGGAAACCTTCTGAAGTTCCAGCTGCAGACAAGAACAAAAAAGACGATGTTGAAAAGCCCCACAGGTGTGACCTTGATGGTTGCAGTATGAGTTTCATGACAAAGGGTGAGTTACAGTTGCACAGGCGTAACCTTTGCCCTCAGAAAGGGTGTGGCAAGAAGTTCAGCTCCCACAAATACGCTCTCCTTCATCAGCGTGTTCATGATGACAAGAGGCCCCTCAAGTGCCCATGGAAAGGTTGTACCATGTCATTCAAGTGGGCATGGGCAAGGACGGAGCACATACGGGTGCACACTGGGGAGAAGCCCTATAAATGCAAGGTCGAGGGGTGCGGCCTTTCTTTCAGGTTTGTATCGGATTTTAGCCGGCACAGGAGAAAAACAGGTCACTACGTGAAATCGGATTGA 4149 0.4244 MGNVEIPNWLKVLPLAPEFRPTDTEFADPIAYISKIEKEASHYGICKIIPPLPKPSKKYVFSNLNKSLLKASELGPESDSLGCCNSSRTDSRDVGSNDRLLRAVFTTRQQELGQNVKKTSKGNIQNPLPGGQKQVWQSGEVYTLDQFESKSKSFAKSVLATVKEVSPLVIEAMFWKATSEKPIYIEYANDVPGSAFGESQGQFLYSHRRRRKRTYYKSRPHSSDSKQTEMDGIGDTQIDENKGASAKTHAEQCVQSQTASTVTLASNEVSQSSREKGSDAADDDMEGTAGWKLSNSPWNLQVIARSSGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSLNFLHTGSAKTWYAVPGEYAFAFEDVIRSKAYGSSVDHLAALKLLGEKTTLISPEVVVASGIPCCRLIQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFISRVPRTLLPGVRSSRLRDRQKEEREFLVKKAFIEDMLQENKLLSTLLGKEATKQAVLWNADLLLGSSKDCSLPEVSAAETAMVDMPNTSLGDKIGHSLIDEMSLYMENLNGLYLDCDDLPSHFQTDSGALACVGCGILGFPFMTVVQPSEKWMETLPGQDCTLNSTAHSSVSGNDSVSELPAAKESPDQSFGCTNCWNMANKFLRPRIFCLEHAVQIVEMLQCKGGANVLIICHSDYEKIKAHARAVAEETHIAFDYNDVPLDTASPENLTLIDLAIDGEEYDECEDWTSNLGINLHHCVNARNKSPSKQAIWTLALGMLFSDKGPGSQFIAINWQSRRARSKRLHHLAPTKPKPSIAIQKREDDELEGRIDDSIARKKLIQYSRRKFKSNQNSYSGSSIVHELQEKSKIVSADSSGDHYKCGSKGELDADNFKSDCALPNASASIAVSPVDHEIRGTEFPNSISLNADTSQTSNSSPGHCFVNENVETEIENHTVQDLGIDGEKDDQSKNHHDTGVLETSGKEELGCQDNKYSRSLVNSTDRNVDVGCKCDSLDLDEELHRENPSACKSNNEEAASSSVSLANQPILASIDDALTELASESAKQCKVQDNNTIYEEPVSSNVARGNTRSEAILELGCSEVAVETCSQEENELKIQPNNRINEEDNSSPKTPLKEDINGSEDKLSQDMMTEQESCKLSNPVPRSNARKKRKTELDQITENQFSCNNFIRSPCEGLRPRATKIAPEKSEGDADQDDKENPKARRDRKPSEVPAADKNKKDDVEKPHRCDLDGCSMSFMTKGELQLHRRNLCPQKGCGKKFSSHKYALLHQRVHDDKRPLKCPWKGCTMSFKWAWARTEHIRVHTGEKPYKCKVEGCGLSFRFVSDFSRHRRKTGHYVKSD* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2953 1382 Gene3D Classic Zinc Finger 1242 1291 - -
Ahy9g2953 1382 ProSiteProfiles Zinc finger C2H2 type domain profile. 1351 1382 IPR013087 -
Ahy9g2953 1382 SMART cupin_9 292 461 IPR003347 -
Ahy9g2953 1382 ProSitePatterns Zinc finger C2H2 type domain signature. 1353 1377 IPR013087 -
Ahy9g2953 1382 ProSiteProfiles JmjC domain profile. 292 461 IPR003347 -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 218 246 - -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 1222 1266 - -
Ahy9g2953 1382 ProSitePatterns Zinc finger C2H2 type domain signature. 1293 1315 IPR013087 -
Ahy9g2953 1382 Gene3D Cupin 9 465 - -
Ahy9g2953 1382 ProSiteProfiles Zinc finger C2H2 type domain profile. 1291 1320 IPR013087 -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 649 672 - -
Ahy9g2953 1382 SUPERFAMILY beta-beta-alpha zinc fingers 1331 1373 IPR036236 -
Ahy9g2953 1382 ProSitePatterns Zinc finger C2H2 type domain signature. 1323 1345 IPR013087 -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 1218 1266 - -
Ahy9g2953 1382 ProSiteProfiles Zinc finger C2H2 type domain profile. 1321 1350 IPR013087 -
Ahy9g2953 1382 Pfam jmjN domain 17 50 IPR003349 -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 984 1006 - -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 1137 1197 - -
Ahy9g2953 1382 SMART JmjN_1 15 55 IPR003349 -
Ahy9g2953 1382 PANTHER LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED 1 1372 - -
Ahy9g2953 1382 Pfam JmjC domain, hydroxylase 325 444 IPR003347 -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 1150 1172 - -
Ahy9g2953 1382 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Ahy9g2953 1382 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1 1372 - -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 248 274 - -
Ahy9g2953 1382 SUPERFAMILY Clavaminate synthase-like 293 458 - -
Ahy9g2953 1382 MobiDBLite consensus disorder prediction 209 292 - -
Ahy9g2953 1382 SMART c2h2final6 1351 1377 IPR013087 -
Ahy9g2953 1382 SMART c2h2final6 1321 1345 IPR013087 -
Ahy9g2953 1382 SMART c2h2final6 1291 1315 IPR013087 -
Ahy9g2953 1382 SMART c2h2final6 1268 1290 IPR013087 -
Ahy9g2953 1382 Gene3D Classic Zinc Finger 1292 1375 - -
Ahy9g2953 1382 SUPERFAMILY beta-beta-alpha zinc fingers 1292 1324 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2953 Ahy-Chr9 119002988 119010868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2953 1 870 C2H2 Transcription Factor Family AT5G04240 56.872 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy9g2953 JmjC 3.70E-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2953 - - adu:107467970 2776.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2607 19 146222453 146230337 Ahy9g2953 9 119002988 119010868 hybridization