Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2919 ATGGGGAGGAAAGGGAGTTGGTTCTCTGCTGTGAAGAAAGTTTTTGGTTCTGAAAACAAAAAGGACCAGGAAAAGAACACAAAACCACAGAAAACCCATAGTCATGGCCATAGCCATAGCAATAGTAAGTCCAAATTAGGATGTTTTGGACACCATGATAACAATGAAGCCGGAAATGAAGCGCAGGGAATAGTAGTTGTTCCGGCGCTTCCGCGTAAGAAAGAACCAAAACAAGCAAGAGTGGCAGGTCAGAATGAGCCGGACCAGCAGGCTTTCTCTTTGGTCTTGGCTACTGCTGTCGCAGCAGGTGCTGCTGTCGCGGCCGCGGCTGAGGCTACTCGTCCCAAGACTGTGACGCCTCGTCGCCGTGAAAAACTGAAGGATGATGAAGCAGCAATCATGATTCAGACAGCCTTCCGTGGATATCTGGCGAGGAAAAAACTGCGAGGCTTGAGAGGTTTGTCGAGGTTGAGAACATTGGTAAGAGGGCAATCTGTGAAAAGACAATCAGCCTCTACCTTGCAATGCATGCAGACTCTTTCGAAACTGCAGTCTCAAGTTCGCGCGAGGAAGATCAGAATGTCTGAAGAGAACCAGGCTCTTCAGCGCCAGCTCCTGCAGAAACGGGAGAAGGAGCTTGAGAAGTTGCAAGCTGCTCAAGCTGAATGGGATCATAGAAAGGATTCAAAAGAGCAAGTTGAAGCAAAATTGTTGCACAGGCAAATTGCTACCATGAGAAGGGAGAAGGCTCTGGCTTATTCAATGACACATCAGCAAACTTGGAGGAACAATCTAAAATCAGGCACGAATGCCTCGTTTATGGATCCAAACAATCCTCACTGGGGCTGGAATTGGCTTGAGAGATGGATGGCTGTAAGGCCATGGGAGGGACAAAGCACATTCCAACACAATGAGCCTGCACCTCTAATTAGCACAGCCAGAAGCACGCTATCAGTTGGCGAAATAACCAAACTGTATACTCTACGCGACGATGCTAACATTAGCAAGAACTCCCCTAGGGCCATAAAAACAGGCCGGTCGCGCAGCGGCCTTAACTCGCCCTCAAATGTACTCACCCCATCAAAGTCCACAGCCTTTTTCACAGCTTCCCCCACTCCAAGGAGTCTCAGGGCAGCTAGTCCTAAACTTGGTTCCTGGGGTGGTGATGGAGACAAGAGGAATGCATTTGGCATTAGGAGGGAGGGCAACCGTAGGCACAGCATCGCCATTTCGCCTGCGAGGGATGATGAGCTCCTTAACTCACCTATGAACAGATCACCAAAGAAAGCAGCAGCAACAAAGGCCTCAAAATCCTTCAACATGGCAAAGAGCAGTGTTAGCTCATCTGAGAAATCAAGTCCTGCTGCTGCAGTAAACAAGAGACTCTCTTTGTCTCAATCTCCAACTTCAAATTCAAGAAGGCTTTCTACTCCAGGCAAGGTGGGGACAATTTCCAACAAGAGCAATGCTGCTGGTGCTACTATGAGAAAGTGA 1494 0.4859 MGRKGSWFSAVKKVFGSENKKDQEKNTKPQKTHSHGHSHSNSKSKLGCFGHHDNNEAGNEAQGIVVVPALPRKKEPKQARVAGQNEPDQQAFSLVLATAVAAGAAVAAAAEATRPKTVTPRRREKLKDDEAAIMIQTAFRGYLARKKLRGLRGLSRLRTLVRGQSVKRQSASTLQCMQTLSKLQSQVRARKIRMSEENQALQRQLLQKREKELEKLQAAQAEWDHRKDSKEQVEAKLLHRQIATMRREKALAYSMTHQQTWRNNLKSGTNASFMDPNNPHWGWNWLERWMAVRPWEGQSTFQHNEPAPLISTARSTLSVGEITKLYTLRDDANISKNSPRAIKTGRSRSGLNSPSNVLTPSKSTAFFTASPTPRSLRAASPKLGSWGGDGDKRNAFGIRREGNRRHSIAISPARDDELLNSPMNRSPKKAAATKASKSFNMAKSSVSSSEKSSPAAAVNKRLSLSQSPTSNSRRLSTPGKVGTISNKSNAAGATMRK* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2919 497 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Ahy9g2919 497 SMART iq_5 127 149 IPR000048 GO:0005515
Ahy9g2919 497 MobiDBLite consensus disorder prediction 431 497 - -
Ahy9g2919 497 MobiDBLite consensus disorder prediction 337 375 - -
Ahy9g2919 497 MobiDBLite consensus disorder prediction 1 57 - -
Ahy9g2919 497 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 491 - -
Ahy9g2919 497 MobiDBLite consensus disorder prediction 15 31 - -
Ahy9g2919 497 Gene3D - 119 154 - -
Ahy9g2919 497 Coils Coil 191 226 - -
Ahy9g2919 497 PANTHER IQ-DOMAIN 5-RELATED 1 491 - -
Ahy9g2919 497 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Ahy9g2919 497 MobiDBLite consensus disorder prediction 337 497 - -
Ahy9g2919 497 MobiDBLite consensus disorder prediction 393 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2919 Ahy-Chr9 118462778 118465845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2919 1 481 IQD Protein Family AT5G03040 39.715 3.52e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2919 - - gmx:100807725 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2658 19 147437207 147440287 Ahy9g2919 9 118462778 118465845 hybridization