Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2913 ATGAATTTTGATGGAAATATTACTTATGTAGTTCGACGTGGTCAAAATGCAGATGAAGTGGTAGCTAGAATAAATATTAGTCAACGTAGTGAACGTTACCAGGGAGGAAAAATACACGCCTCAGTTAAGAAGGCTTTTGTTTCTCGATTCGTGAATTTGCTGGAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATAAGGGTTACTTCAAGACTACACATCATGAATACGTGGTTAATTTAAACCAACGTACTGATGTGCACAGACTTCCAGAATCGTCGAGTATCCCACGATATGGATTTAAGTTTGTGAGTTTTGACACTCTCAATGCTCCTGGGTATGATTGCACCTATTTAGTTGATGTTGTTGGATATCTTGCTGGAATTGGGAATGAGAAGACTCTTGAAAAGGATGGCAAATCTACCAAATATACTGTTATCGAATTAGAGATTGATGATGGAAAAATAATGGAGTGTGCACTTTTTGGCAACTATGCACATGAATTAAATGCTTTTCTGGGATCTGGCAATAAGGATGGAGCTGTTGTCGTCTTACAGTTTGTTAGAGTGAAGTTATTTAACGAAAAGATTGTTTTACAAAATTCCATGTATGGCACAAAGATGTTCTTCAATCTTGAAGATACAACTGTCATCCAATTTAAAAATAGCTTTGTAAGATTTGAAGAATCTAGAGGTAACATCGGCGGAATTCCAAATGAGACTGCATTCTTAAAAATTTATCAAGGCAAAACCATCGAGCAGTTAAAAGAATTCGAAACGACTGGTGGCACGGCCAATGTGAATGCAACAGGTCCACATATGCTTTTACAAAAACTTTCAAATGTTCAAGTTGTGGCCGTCTCCTTTTATCCATAA 888 0.3671 MNFDGNITYVVRRGQNADEVVARINISQRSERYQGGKIHASVKKAFVSRFVNLLEEGISYQIRYFGVGLNKGYFKTTHHEYVVNLNQRTDVHRLPESSSIPRYGFKFVSFDTLNAPGYDCTYLVDVVGYLAGIGNEKTLEKDGKSTKYTVIELEIDDGKIMECALFGNYAHELNAFLGSGNKDGAVVVLQFVRVKLFNEKIVLQNSMYGTKMFFNLEDTTVIQFKNSFVRFEESRGNIGGIPNETAFLKIYQGKTIEQLKEFETTGGTANVNATGPHMLLQKLSNVQVVAVSFYP* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2913 295 Gene3D - 10 96 IPR012340 -
Ahy9g2913 295 SUPERFAMILY Nucleic acid-binding proteins 105 228 IPR012340 -
Ahy9g2913 295 Pfam Domain of unknown function DUF223 34 111 IPR003871 -
Ahy9g2913 295 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 79 266 - -
Ahy9g2913 295 CDD RPA1_DBD_B_like 125 228 - -
Ahy9g2913 295 SUPERFAMILY Nucleic acid-binding proteins 35 99 IPR012340 -
Ahy9g2913 295 PANTHER REPLICATION FACTOR A 1, RFA1 79 266 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy9g2913 295 Gene3D - 99 234 IPR012340 -
Ahy9g2913 295 CDD RPA1_DBD_A_like 33 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2913 Ahy-Chr9 118398167 118402025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2913 33 217 Core DNA Replication Machinery Family AT2G06510 25.521 7.98e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2913 - - ahf:112722049 516.538