Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2912 ATGCAAAACAAAATGGAATACAAACTCAATTCTTCTTCATCGATTCCAATAATCCACGTCCCCACAAAGATCTCAAATTCTCCACCTCCTTCTTCTTCTCCTCCCATTTCACAATCTCAATCTCCAACTTCCTGTGCTCCGCCGTCGCCGCCTCCACCTGTGGTGGTGAGCCCTTGCGCCGCCTGTAAGATCCTCCGTCGCCGCTGCGTTGAGAAGTGTGTTCTTGCTCCTTACTTCCCTCCAACTGATCCACTCAAGTTCACCATTGCCCATAGAGTCTTTGGAGCAAGTAACATTATCAAGTTCTTGCAGGAACTACCAGAAAACCAAAGGGCAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAATTAGGGACCCAGTTTATGGTTGTGCAGGAGCAATATGCCAACTCCAAAAGCAAGTGAGTGAGCTTCAAGCACAATTGGCAAAAGCACAAGCTGAGCTTGTTAACATGCACTGCCAACAAACCAATTTGGTTGCACTCATTTGCATGGAAATGAGTACTAGTAATACTCATCAATCATCTTCACATCAGGAACAACACCACATGATGATGATTCAGCCTCAGAATAATAATAACAATAATAATCATGTTGATATGTCTTGCTTCATTGATGACAACAATCTTGCTTCTGCTTGGGAGCCTCTATGGACATAA 687 0.4425 MQNKMEYKLNSSSSIPIIHVPTKISNSPPPSSSPPISQSQSPTSCAPPSPPPPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPENQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMHCQQTNLVALICMEMSTSNTHQSSSHQEQHHMMMIQPQNNNNNNNHVDMSCFIDDNNLASAWEPLWT* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2912 228 Coils Coil 137 164 - -
Ahy9g2912 228 MobiDBLite consensus disorder prediction 19 48 - -
Ahy9g2912 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 43 225 - -
Ahy9g2912 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 43 225 - -
Ahy9g2912 228 ProSiteProfiles LOB domain profile. 57 158 IPR004883 -
Ahy9g2912 228 Pfam Lateral organ boundaries (LOB) domain 58 155 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2912 Ahy-Chr9 118389347 118391410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2912 54 228 AS2 family AT1G07900 62.570 4.67e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy9g2912 LOB 2.60E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2912 - - gmx:100806667 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2662 19 147508584 147510571 Ahy9g2912 9 118389347 118391410 hybridization