Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2904 ATGCTGTTTCGCCCTTCAACTGGTAATCTGGATGAGAGGGTCACAGACAGAGTCTTGTATGATATTTTAATTCAAGCAGGACGAGTGGTAGATTTACATATTCCTAAAGATAAGGAATCAGAAAAACCGAAAGGCTTTGCCTTTGCAGAATATGAAACTGAGGAGATTGCGGATTATGCTGTCAAGCTTTTCTCAGGCCTTGTAACACTCTACAACAGAACACTGAAGTTTGCGTCTACTAAAAAACAGATATCTGGGAGAGATAAAACCCCTAACGGTTCTGCTGGAGTTACACCAACATCAAATTCTTCTCAAAGATCAAGGCCTTATCCAGTGCCGTTTAATAACTCAGAATCTGATAAGCTATCAGCACATGACCGTTTTTCGGATTATGCAGCTCCTCGTCGCCGTGTAACTGACCTACCTAGTGGGCATGGATCTTACAACAGTGGCCATGATTTTGGGTTCAGCCGTAGAGCTTTTGGGGCAACATTGGACAGCATAAGTGGTTCTAGGTCTCGCCGCTAG 528 0.4356 MLFRPSTGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVKLFSGLVTLYNRTLKFASTKKQISGRDKTPNGSAGVTPTSNSSQRSRPYPVPFNNSESDKLSAHDRFSDYAAPRRRVTDLPSGHGSYNSGHDFGFSRRAFGATLDSISGSRSRR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2904 175 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 76 IPR000504 GO:0003723
Ahy9g2904 175 Gene3D - 7 89 IPR012677 -
Ahy9g2904 175 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 82 IPR000504 GO:0003723
Ahy9g2904 175 SUPERFAMILY RNA-binding domain, RBD 8 100 IPR035979 GO:0003676
Ahy9g2904 175 SMART rrm1_1 8 78 IPR000504 GO:0003723
Ahy9g2904 175 MobiDBLite consensus disorder prediction 81 154 - -
Ahy9g2904 175 MobiDBLite consensus disorder prediction 120 134 - -
Ahy9g2904 175 PANTHER OS01G0876500 PROTEIN 7 175 - -
Ahy9g2904 175 MobiDBLite consensus disorder prediction 81 119 - -
Ahy9g2904 175 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 7 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2904 Ahy-Chr9 118267165 118270385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2904 K12831 - gmx:100784532 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2671 19 147718810 147722044 Ahy9g2904 9 118267165 118270385 hybridization