Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2889 ATGACACTAACACAAATTCCTGAGAGAGCAACAATGGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCACCCAACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAAATTAACTCCCTCAAAATTGATCTAGATGTTATAGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAACAAAATGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCCACTGCTGCTGGATTCTGGAAAGCAACTGGGAGAGACAAGGCTGTTATGTCCAAGAACAGGATCATTGGTATGAGGAAGACTTTGGTCTTCTACAAAGGACGTGCCCCTAATGGCCGCAAAACTGATTGGATTATGCACGAATATCGCCATCAAACCTCTGAACATGGCCCTCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGCATTTCGAAAACCAAGTCCAAGTCATCAAAGGCAATTAGGGTTTGATCCATGGTGTAGTAATCATCATCATCAAGCACATTATTTCAGAGATCAAAGTAGCTATGGTGGAAGGCCCTTATCAATCACAGATCTTCTAACTTCAGAAACTCATCTTCTGAATCACCCTACTGAAGGTACAAATTTTAGTCATTCCTTCGGTTCAGATCATCATCATCATCATCAAGAACAAGAGTTTGTAATATCAAATAATCATCAACAACTCATTGAGCTTCCACAGCTAGATAGCCCAACAACAACAAGTTTTGCAGTCAAAGAATCATCATCCATTAATAATAACAATGAAGAGTATTGCAGTGATGACAGGAACAACAACAACAACAACATTGATTGGAAAAGCTTGGATAACCTGTTTGCTGATACTTCTAATTACTTCTCATCAAATCCAAACATGTCCCAATTCATGACCATCAATCATCATCTAGGTTGTTTCCCTGGTTCATAA 993 0.3958 MTLTQIPERATMDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHQRQLGFDPWCSNHHHQAHYFRDQSSYGGRPLSITDLLTSETHLLNHPTEGTNFSHSFGSDHHHHHQEQEFVISNNHQQLIELPQLDSPTTTSFAVKESSSINNNNEEYCSDDRNNNNNNIDWKSLDNLFADTSNYFSSNPNMSQFMTINHHLGCFPGS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2889 330 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Ahy9g2889 330 SUPERFAMILY NAC domain 11 167 IPR036093 GO:0003677|GO:0006355
Ahy9g2889 330 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Ahy9g2889 330 ProSiteProfiles NAC domain profile. 18 167 IPR003441 GO:0003677|GO:0006355
Ahy9g2889 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 311 - -
Ahy9g2889 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2889 Ahy-Chr9 118111102 118115316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2889 14 330 NAC Transcription Factor Family AT1G71930 53.846 1.10e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy9g2889 NAM 6.90E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2889 - - gmx:100812904 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2695 19 148020021 148024717 Ahy9g2889 9 118111102 118115316 hybridization