Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2875 ATGTCTACAACAACACAAAGGGAAGCGTTTGGTGGCGTAGAAACTCCAAATGGAGACTCACCCAAACAACCCCCTCGAGAATCCCGTGACATCCCTCCTTTAATGTCCCCTTCTTACCCAATCACTCTCAAGTTCATGGACGTGGGGTACCGGATAAAGATAGAGAACAAGCAAGCTAAAGGAAGGTGCATTAAGAAACTTTTCGCAACTGATCGCGAGTCACCAACACCGTCCGATCAGACAAGATCAACGGTGATGCAAGAAAGAACAATTCTAAACGGAGTAACAGGGATAGCGTACCCGGGAGAGATCCTAGCCATCCTTGGTCCATCAGGAAGCGGCAAATCAACGCTCCTAAACGCGCTTGCAGGGAGACTCCATGGTCACGGCCTCACCGGAACAATTCTCGCAAACTCATCCAAGCTCACCAAACCGATTCTCCGCCGAACCGGATTCGTTACTCAGGACGACGTGCTTTACCCGCACCTCACCGTCCGCGAAACCCTAGTCTTCTGCTCCATGCTCCGCCTCCCTCGTTCGCTGCCGCGTGAGGCGAAGATTGCGGCGGCGGAGTCGGCGATTGCAGAGCTTGGACTAGGCAAGTGCGAGGACACCATAATCGGGAACAGCTTCATCCGCGGTGTCTCCGGCGGGGAGAGGAAGCGCGTGAGCATTGCGCATGAGATGCTTGTGGATCCGAGCCTGCTGCTGCTGGACGAGCCGACGTCGGGGCTGGACTCCACGTCGGCGCACCGCCTCATTTCGGTGCTCGGTTCGCTAGCGAAGAAGGGGAAGACGGTGGTTACGTCGGTGCACCAACCGTCGAGCCGCGTTTTCCAGATGTTCGATAAGGTTCTCGTGCTCTCCGAAGGGAATTGCCTCTACTTCGGTAAAGGATGCGACGCCATGCGGTACTTTGAGTCCGTTGGTTTTGTGCCATCTTTTCCGATGAACCCCGCCGATTTCCTTCTCGATCTCGCTAACGGTGTTAGCCATGTTGATGGTGTAAGTGAAAGAGATAAGCCAAACATAAGGCAGAACCTAATTCATTCATACAACACAACACTAGCTCCAAAGGTAAAAGCTTTATGCATTGACACTCCCAACATTGTTAATCCTACAAAGAACACACACCCTATGGGAAGAAGCAGATATAGTGACAGGGTTAGCTTCTTAGATTGGTTCAACCAATTCAGCACACTCTTCCAAAGAAGCCTCAAAGAGAGAAAGCATGAATCATTCAACACTCTGAGAGTGTTCCAAGTCATTGCAGCTGCACTATTAGCAGGCCTAATGTGGTGGCACTCTGACTACAGAAATGTTCAGGACAGGCTTGGCCTACTCTTCTTCATTTCAATCTTCTGGGGTGTATTCCCATCCTTCAACTCTGTTTTTGCCTTCCCCCAAGAGCGCGCCATCTTCATGAAAGAAAGGGCCTCTGGAATGTACACATTGTCATCCTACTTCATGTCTCGAATAGTGGGTGATCTTCCAATGGAGCTTATCCTGCCCACAATTTTCCTCATTGTGACATATTGGATGGGAGGCCTAAAGCCTGATCTGGTGGCATTTCTATTGACATGGTTGGTCATCCTTGGATATGTCCTTGTCTCGCAGGGTCTTGGACTCGCCTTAGGCGCCGCGATAATGGATGCCAAACAAGCTTCAACTGTTGCAGCAGTGACAATGCTAGCATTTGTGCTAACAGGTGGATACTATGTCCATAAGGTTCCAGCATGCATGGCTTGGATCAAATACATATCCACAACTTTTTACTGTTATAGGCTTCTGACTAGGATTCAGTATGGTGATGGAAGAAAAATCTCATACATGTTGGGTTGCAATCATGGTGGTGGAGACAGGGCTAATTGCAAGTTTCTTGAAGAGGATGTGATGGGCCAAATTGGCACTGTGGGAAGCATTGGTGTCTTGTTTCTCATGTTTGTAGGGTACAGATTATTGGCCTACCTTGCATTGAGGCGCATCAAGATTTAG 1995 0.4957 MSTTTQREAFGGVETPNGDSPKQPPRESRDIPPLMSPSYPITLKFMDVGYRIKIENKQAKGRCIKKLFATDRESPTPSDQTRSTVMQERTILNGVTGIAYPGEILAILGPSGSGKSTLLNALAGRLHGHGLTGTILANSSKLTKPILRRTGFVTQDDVLYPHLTVRETLVFCSMLRLPRSLPREAKIAAAESAIAELGLGKCEDTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLLLDEPTSGLDSTSAHRLISVLGSLAKKGKTVVTSVHQPSSRVFQMFDKVLVLSEGNCLYFGKGCDAMRYFESVGFVPSFPMNPADFLLDLANGVSHVDGVSERDKPNIRQNLIHSYNTTLAPKVKALCIDTPNIVNPTKNTHPMGRSRYSDRVSFLDWFNQFSTLFQRSLKERKHESFNTLRVFQVIAAALLAGLMWWHSDYRNVQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFMKERASGMYTLSSYFMSRIVGDLPMELILPTIFLIVTYWMGGLKPDLVAFLLTWLVILGYVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPACMAWIKYISTTFYCYRLLTRIQYGDGRKISYMLGCNHGGGDRANCKFLEEDVMGQIGTVGSIGVLFLMFVGYRLLAYLALRRIKI* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2875 664 Gene3D - 81 309 IPR027417 -
Ahy9g2875 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 308 IPR027417 -
Ahy9g2875 664 Pfam ABC transporter 93 243 IPR003439 GO:0005524
Ahy9g2875 664 MobiDBLite consensus disorder prediction 1 36 - -
Ahy9g2875 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 21 662 - -
Ahy9g2875 664 SMART AAA_5 101 292 IPR003593 -
Ahy9g2875 664 Pfam ABC-2 type transporter 397 601 IPR013525 GO:0016020|GO:0140359
Ahy9g2875 664 CDD ABCG_EPDR 89 297 - -
Ahy9g2875 664 Pfam ABC-2 type transporter 272 344 IPR043926 GO:0140359
Ahy9g2875 664 PANTHER ABC TRANSPORTER G FAMILY MEMBER 25 21 662 - -
Ahy9g2875 664 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 315 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2875 Ahy-Chr9 117943820 117950409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2875 91 297 Calmodulin-binding Proteins AT2G36910 31.280 7.74e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2875 K05681 - gmx:100812367 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2715 19 148429400 148436003 Ahy9g2875 9 117943820 117950409 hybridization