Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2871 ATGATTTTCAACCAAAAGCTTTGCCCTTTTGTTCTTTTCAAATCTTTTGCACTGATGGGTACCTCGAATCTTCTCCTCTTTCTCTTCTCTCTGCTGGGTTTGTGTGCTTTGTCAGCTGCCAAAGTGGTGCTGATTGGGAACAACATCACTCTCTCCTTCGATGATATCGAAGCTAATTTCGCTCCGACGATCAAAGGGTCTGGAGAATGTGGGGTCTTATATTCGGCAGAGCCACTTGATGCTTGCACTGACCTCTCGAACAAAGCTCCACAACTTCCAAATGCGAGTTTGCCTTTTGTTTTGATGATTAGGGGAGGATGTAGCTTTGAGGAAAAGGTCAGAAGAGCACAAGCGGCTGGCTACAAAGCTGCAATTGTCTATGACAATGAGGATAGTGGTGTCTTGGTTGCAATGGCAGGAAATTCTGCTGGCATAAGAATACATGCTGTGTTTATATCAAAAGCTTCAGGTGAATTACTAAAGGAATATGCTGGAAGGACTGATGTGGAGCTATGGCTTATTCCAAGTTTTGAGAACTCAGCATGGTCAATCATGGCAATTTCATTTATTTCCCTACTAGCAATGTCTGCTGTGCTTGCCACCTGTTTCTTTGTTCGTAGGCATCGCATAAGAAGGGAAAGGCCTCAAGCTTCTCGTGTTCGTGAATTTCATGGTATGAGTAGTCGCCTAGTGAAAGCAATGCCTAGTTTGATATTTACTGCAGTCTTAGAAGACAACTGTACCTCAAGAACATGTGCCATATGTCTTGAAGATTATTGTGTTGGAGAGAAGCTCAGGATACTCCCTTGTTGTCACAAGTTTCATGCTATATGCGTGGATTCTTGGCTTACCTCATGGAGAACATTTTGCCCAGTTTGTAAGCGTGATGCAAGAACTGGTTTAAGCGAACCTCCGCCTTCTGAATCCACGCCTTTGCTTTCGGCCAGCCCAGCATCTGTATCATCCTCCATCTTATCTTCTACAAGGTCATCATTAGCGTCATCCCCAGCTATTCAAATTGCTCGTCCACCTTCACATGCCTCGTCCGTTTCTCGCAACCACTCATTAGCTAGCACCCCTTATGTTCAGCCGTCTTATAGGTCCTACCGACAATCCCCATCGCGAAGCATCAGTCGAAGCTCTGTAGACCTTAGGAATGCATCCCAAAGATCTCTAGCTTCTCACTTGAATTCACCACATTCCATGGGCTACCCATCTTTGTCTTCTCTTAACTCAAGGTTCATGTCTGCTTATGTTCCAAGTCCTAGCAATGCTTCTGTAAGTATTCTCGGGTCATCAAGTCACCGACAGCATCCACTCCGATACAGTGAGTCAGCTGCGAGTTTCTCGCCATTTGCATCCGCAAACTCCCTCCCAGAGTGTTAA 1386 0.4517 MIFNQKLCPFVLFKSFALMGTSNLLLFLFSLLGLCALSAAKVVLIGNNITLSFDDIEANFAPTIKGSGECGVLYSAEPLDACTDLSNKAPQLPNASLPFVLMIRGGCSFEEKVRRAQAAGYKAAIVYDNEDSGVLVAMAGNSAGIRIHAVFISKASGELLKEYAGRTDVELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPQASRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYCVGEKLRILPCCHKFHAICVDSWLTSWRTFCPVCKRDARTGLSEPPPSESTPLLSASPASVSSSILSSTRSSLASSPAIQIARPPSHASSVSRNHSLASTPYVQPSYRSYRQSPSRSISRSSVDLRNASQRSLASHLNSPHSMGYPSLSSLNSRFMSAYVPSPSNASVSILGSSSHRQHPLRYSESAASFSPFASANSLPEC* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2871 461 CDD mRING-H2-C3H2C2D_ZSWM2 251 294 - -
Ahy9g2871 461 SUPERFAMILY RING/U-box 242 305 - -
Ahy9g2871 461 SMART ring_2 252 293 IPR001841 -
Ahy9g2871 461 CDD PA_C_RZF_like 35 181 IPR044744 -
Ahy9g2871 461 MobiDBLite consensus disorder prediction 366 402 - -
Ahy9g2871 461 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 299 IPR013083 -
Ahy9g2871 461 Gene3D - 41 174 - -
Ahy9g2871 461 ProSiteProfiles Zinc finger RING-type profile. 252 294 IPR001841 -
Ahy9g2871 461 SUPERFAMILY PA domain 100 168 IPR046450 -
Ahy9g2871 461 Pfam Ring finger domain 251 294 IPR001841 -
Ahy9g2871 461 PANTHER PROTEASE-ASSOCIATED (PA) RING/U-BOX ZINC FINGER PROTEIN 19 397 - -
Ahy9g2871 461 Pfam PA domain 83 160 IPR003137 -
Ahy9g2871 461 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 19 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2871 Ahy-Chr9 117902448 117907282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2871 37 460 C3H Transcription Factor Family AT1G22670 48.724 7.52e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2871 K15692 - gmx:100791248 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2720 19 148485543 148490445 Ahy9g2871 9 117902448 117907282 hybridization