Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2848 ATGGGTGCTGAAGCTGGTGCAACTGAGTGTTTCAGTAAGGCCATGGCGTCGATGCCTGGGTTTCGGTTTCATCCCACGGATGAGGAGCTGGTTATGTACTATCTGAAGAGGAAGATATGTGGGAAGAAGCTGAAACTCGACGTGATTCTAGAAACCGATGTTTACAAGTGGGATCCTGAGGAATTGCCAGAGATATCTGTACTGAGGACTGGAGATAGGCAATGGTTCTTTTTCACTCATAGAGATAGGAAGTATCCTAATGGTGCGAGGTCCAACCGAGCAACAAGGCAAGGTTACTGGAAAGCAACAGGAAAGGATCGTAATGTGACCTGCAATTCTCGGTCAGTTGGAGTGAAAAAGACTCTGGTTTTCTATAGAGGCAGAGCTCCTAATGGTGAGCGGACCGATTGGGTTATGCATGAATACACCATGGATGAAGAAGAGCTGAATAGGTGCCAAGATATTAAGGACTATTTTGCACTTTACAAGCTATACAAGAAAAGTGGACCTGGTCCTAAAAATGGAGAACAGTATGGTGCACCATTTAAAGAAGAGGAGTGGGCTGATGACGAATGTGTAGATTTCAATATTAACTCAGCAGATCGGGAGGTAGTAAATACTGTCCCTGTTAATGATCAGCTGCCTCCTTTGGCCGATGATGAAGTCACGGATATGATTAATCAAATTTTGGATAATGAGCTTGCCCTTGACCAGCAATTTGGTGACGGCCTTGAATTTCCTCAGGTTGTTGCTGAAGAAACACAAAGTACTGTGGTGGATCAGTTCTCTGAGGCAGTGACGGACCCCGAGTACAACGATATTTACCACTCAACCAGTCAGCACTATGATGTGCAGAATGTCAACTTCAATCAGTCGGTTGCATCTCACCTTCATGCCCCGGAGGGATCAGAAGTTATTTCTACTGCCAACATTCAAGTAGAAGACTATAACTTTCAGGAGGATGACTTCTTGGAAATCAACGATCTCAATGGTAGTGAACTTACAATTCCAAATATGGAAACACCAGTGGAGAACCTGCAGTTTGAAGATGGATTGTGTGAACTTGATCTGTTCCAAGATGCAGAGATGTTTCTTCGTGACTTGGGACCAATCAATGAGGAAACCATTCCACATTCATATATGAATAATGCCGCTGGAAGCAACATTGAAAATCAGAATTATCACTTGCTGCCCAATCCAGAGGACGCTACTCAAAATGTTCATGAATTTTGGATGCATGATGAAAGAAACACCTCGAGTCTGTTTGAAGGCTTTGATGATTCTCTCTCTCAACAAAATCCAGGTGCTGTATCTACTGAAGGCTATGATAATCAAAGTAGCATTGCAGAAGATGTTGCTACAAGTAGATTCTCTTCGGCTCTCTGGTCCTTTGTTGAGTCAATACCTACCACTCCTGCATCAGCTGCGGAAAATGCTCTAGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCCGAGTGAAGATTAATATCAAGCCGACGAACACAGCTGCAGGTAAAGACACTGCAACTACGAAGAGAGTGGGCAGAAAAGGATTTTCATTCCTTTTCTTCCCAATTATTATTGCTTTATGTGCTTTCTTATGGGTTTCTCTTGGAACTTTTAGATTATTAGGGAGATGCATCGCTCCTTGA 1656 0.4324 MGAEAGATECFSKAMASMPGFRFHPTDEELVMYYLKRKICGKKLKLDVILETDVYKWDPEELPEISVLRTGDRQWFFFTHRDRKYPNGARSNRATRQGYWKATGKDRNVTCNSRSVGVKKTLVFYRGRAPNGERTDWVMHEYTMDEEELNRCQDIKDYFALYKLYKKSGPGPKNGEQYGAPFKEEEWADDECVDFNINSADREVVNTVPVNDQLPPLADDEVTDMINQILDNELALDQQFGDGLEFPQVVAEETQSTVVDQFSEAVTDPEYNDIYHSTSQHYDVQNVNFNQSVASHLHAPEGSEVISTANIQVEDYNFQEDDFLEINDLNGSELTIPNMETPVENLQFEDGLCELDLFQDAEMFLRDLGPINEETIPHSYMNNAAGSNIENQNYHLLPNPEDATQNVHEFWMHDERNTSSLFEGFDDSLSQQNPGAVSTEGYDNQSSIAEDVATSRFSSALWSFVESIPTTPASAAENALVNRALNRMSSFSRVKINIKPTNTAAGKDTATTKRVGRKGFSFLFFPIIIALCAFLWVSLGTFRLLGRCIAP* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2848 551 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 17 549 - -
Ahy9g2848 551 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Ahy9g2848 551 Gene3D NAC domain 26 169 IPR036093 GO:0003677|GO:0006355
Ahy9g2848 551 PANTHER NAC TRANSCRIPTION FACTORS 2 17 549 - -
Ahy9g2848 551 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Ahy9g2848 551 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2848 Ahy-Chr9 117567044 117571051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2848 3 549 NAC Transcription Factor Family AT1G34190 40.962 8.20e-130 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy9g2848 NAM 4.10E-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2848 - - gmx:100794925 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2751 19 149054424 149058440 Ahy9g2848 9 117567044 117571051 hybridization