Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2827 ATGCCGGAATCGGAGACCGGGACGCCAACAGCGGCGCCTATGCCGGCGACGCCGGATACTCCGGGAGGGCCGCTGTTCACGTCGCTTCGAGTGGACTCGCTGACACACGAACCGTCGTTTACAATGGCGGGAAGGTGCGGCACGTGTTTGCCAGCTGCCATGAGTAAGAGCCATAGTTGCATCACTGATTTCACTGTTGGTGTTCCAATGCCAAATGTGTCTCTCGCTCAAAAGGTTGGAGCAGAGTTTGTTGGAACATTCATACTGATATTTGCAGCAACAGCAGGGCCCATTGTGAACAACAAGTACAACGGAGCAGAGACTCTAATGGGCAACGCAGCATGCGCCGGCCTCACCGTCATGTTCATAATCCTCTCCATTGGCCACATCTCCGGCGCCCACCTAAATCCATCCCTCACCATCGCCTTCGCCGCGTTTCGCCACTTCCCATGGACTCATGTCCCTGCCTACATTGCCGCACAAGTCTCTGCCTCCATTTGCGCCTGCTTTGCTCTCAAGGGCGTTTACCACCCTTACCTCTCCGGCGGCGTCACCGTGCCTTCTAACATCACTGTTGGCCAGGCCTTTGCCACTGAATTCATCATCACTTTCATTCTCATGTTTGTTGTAACTGCCGTTGCCACTGATACTCGTGCTGTTGGAGAGTTGGCTGGTATAGCTGTTGGTGCCACTGTTTTGCTCAACATTCTCATTTCAGGGCCAACAAGCGGCGGTTCGATGAATCCGGTTCGAACGTTGGGTCCAGCGGTAGCGGCAGGGAATTACAAACACATATGGCTGTACTTGGTGGCGCCAACACTGGGTGCCCTTGCAGGCGCCGGCGTTTATACGCTGGTTAAGCTGCAGGAAAGCGATGCTCAGCCGCCGCGACAGACTAGGAGCTTCCGTGACAGGGCAGGCTAG 924 0.5541 MPESETGTPTAAPMPATPDTPGGPLFTSLRVDSLTHEPSFTMAGRCGTCLPAAMSKSHSCITDFTVGVPMPNVSLAQKVGAEFVGTFILIFAATAGPIVNNKYNGAETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACFALKGVYHPYLSGGVTVPSNITVGQAFATEFIITFILMFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWLYLVAPTLGALAGAGVYTLVKLQESDAQPPRQTRSFRDRAG* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2827 307 Pfam Major intrinsic protein 73 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 Gene3D Glycerol uptake facilitator protein. 69 300 IPR023271 -
Ahy9g2827 307 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Ahy9g2827 307 SUPERFAMILY Aquaporin-like 74 294 IPR023271 -
Ahy9g2827 307 PANTHER AQUAPORIN NIP5-1-RELATED 12 301 - -
Ahy9g2827 307 CDD MIP 77 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PANTHER AQUAPORIN NIP2-1 12 301 IPR034294 -
Ahy9g2827 307 MobiDBLite consensus disorder prediction 1 23 - -
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 198 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy9g2827 307 PRINTS Major intrinsic protein family signature 266 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2827 Ahy-Chr9 117328014 117338351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2827 25 303 Major Intrinsic Protein MIP AT4G10380 72.695 2.37e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2827 K09874 - gmx:100775229 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2770 19 149409057 149419692 Ahy9g2827 9 117328014 117338351 hybridization