Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2814 ATGGCCATACCCATTTCTTTCTCTCTCTCTCTCTCTTACCCCGTCAGTATCTCACTTTCTCTCTTCATACACCCTTTCTCTCTCATGGAAAAGGCACTCCAAGCCGTCTTGGCCGCCGCCGGCACCTTCTTTGCCGTCACCCTCCTCTTGGCCATCGTCATCCTCGCCTGCCAGCGCCGCAAGGCCAAGACCTCCATGCTTCTAACCCGCCACGACAACCGCGCTACCAACCCAACCCGAACCCGAACCCGACCCCTCCCAAACACTGACCAATCGTCCGTCTCCGTCGTAGATGCCAGCTGGTCCTCCGATCCCAACCTCAAGATCTCCCTTACCGAGCTCGCACGCGCCACTGAAAACTTCTCTCCAAATCTCATCGTCGGCGACGGCAGCTTTGGCCTCGTCTATAAGGCCCGCCTCAACGACGGCACCGTCGTCGCCGTCAAGAAGCTCTCCCCGGACGCTTTCCAAGGCTTCCGCGAGTTCCAGGCCGAGATGGAAACTCTAAGCAAGCTCGATCACCCAAACATCGTCAAGATCCTCGGCTACTGGTCCTCCGGGCCCGAACGCTTACTCGTCTACGAGTTCATCGAACGGGGAAACCTCGATCAGTGGCTCCACGAGCCCACCACTGGGCCCAACGACCACATCTCCCTCAGCGACCTCCGTTTACCTCTGTCATGGGAAACCAGGGTCAACATCATTAGAGGCGTGGCCCACGGGCTTTACTATCTCCACGGGCTTGATAAGCCCATCATACACAGGGACATCAAAGCCAGTAACGTGTTATTGGACTCCGAGTTCAAGGCCCATATAGCTGATTTCGGGCTTGCTCGGAGGATTGACACGTCCAAATATTCACACGTGTCAACGCAGTTTGCTGGGACCATGGGCTACATGCCCCCGGAGTATGTTGCTGGGGCCAATGTGGCCAACCAGAAGGTGGATGTGTATAGCTTTGGGATTTTGATGCTTGAGACGGGCTCAGGGCGCAGGACTAATTTGCCAGTGAAGTTAGGGGAGGAAGATATTGGGCTGGTCCAGTGGGCCCGGAAGATGAAGGAGCGAAATGCTGAGATGAATATTGTTGATGTGAATATTTCAAGGGAAGGTTTAAGGGAAGAGTGTGTTAAAGAGTATGTGAGGATTGCTTGCATGTGCACTGCTGAGTTGCAGAAGGAAAGGCCTGAGATGCCTGAGGTTGTTCGCTTGTTGGATTCCATGCCGCTCTGA 1233 0.5491 MAIPISFSLSLSYPVSISLSLFIHPFSLMEKALQAVLAAAGTFFAVTLLLAIVILACQRRKAKTSMLLTRHDNRATNPTRTRTRPLPNTDQSSVSVVDASWSSDPNLKISLTELARATENFSPNLIVGDGSFGLVYKARLNDGTVVAVKKLSPDAFQGFREFQAEMETLSKLDHPNIVKILGYWSSGPERLLVYEFIERGNLDQWLHEPTTGPNDHISLSDLRLPLSWETRVNIIRGVAHGLYYLHGLDKPIIHRDIKASNVLLDSEFKAHIADFGLARRIDTSKYSHVSTQFAGTMGYMPPEYVAGANVANQKVDVYSFGILMLETGSGRRTNLPVKLGEEDIGLVQWARKMKERNAEMNIVDVNISREGLREECVKEYVRIACMCTAELQKERPEMPEVVRLLDSMPL* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2814 410 SMART serkin_6 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2814 410 Pfam Protein tyrosine and serine/threonine kinase 127 405 IPR001245 GO:0004672|GO:0006468
Ahy9g2814 410 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Ahy9g2814 410 Gene3D Transferase(Phosphotransferase) domain 1 197 409 - -
Ahy9g2814 410 SUPERFAMILY Protein kinase-like (PK-like) 92 404 IPR011009 -
Ahy9g2814 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Ahy9g2814 410 PANTHER OS01G0253100 PROTEIN 29 407 IPR045271 GO:0004714|GO:0006468
Ahy9g2814 410 PANTHER RECEPTOR SERINE-THREONINE PROTEIN KINASE 29 407 - -
Ahy9g2814 410 ProSiteProfiles Protein kinase domain profile. 121 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2814 410 CDD STKc_IRAK 127 408 - -
Ahy9g2814 410 Gene3D Phosphorylase Kinase; domain 1 85 196 - -
Ahy9g2814 410 MobiDBLite consensus disorder prediction 72 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2814 Ahy-Chr9 117219763 117221872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2814 33 408 Receptor kinase-like Gene Family AT5G07280 38.660 2.40e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Ahy9g2814 PK_Tyr_Ser-Thr 7.70E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2814 - - gmx:100802728 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2784 19 149565673 149568284 Ahy9g2814 9 117219763 117221872 hybridization