Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2783 ATGCTTGGGGACTCAGCACTATTAGGAGGTGGAGGAAGTAGTGGTGGTGCTTCCGATGATGCAGTGGCGGCAGCAGCAGCGGTGGCAGCATCAGGTGGCGGTGGCGGATCAAATAATTCAGGCGACGATGAAAGAGGGAGGAATATAGAAGAAGGTGGCAGCAGCTTCGGCGGTAACCGGTGGCCGCGGCAAGAGACTTTGGCGCTGTTACGGATACGCTCCGATATGGAAGCTGCCTTTCGAGAGGCAAGTGTTAAGGGTCCTTTGTGGGAACAAGTCTCCAGGAAGATGGCAGAGCTTGGGTATCAGAGAAGTTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTTATAAGTACCATAAGAGAACAAAAGAAGGTCGAACTGGTAAATCAGATGGCAAAACTTACCGCTTCTTTGATCAGTTAGAAGCCCTTGAGAATCAGTCCCAGACAACACTTCTTCATCATCAATCTCCTAAACCAACGCCAATGCCTCCTCCTCCGCCTCCGCCTCCGCCACCACCACCACCACCACCAACAACAACACATGTCACTGTTCCATCAACAACAATTATCCCTTCCTACCAAACAACACCACCACCACAACCAACAAACCCTACTACCTTACTATTCCCTTCTTCATCCACGACCACCATCCCGACCGATCTCCTCTCCAACTCCACCTCTTCCTCCACTTATTCCGACGAATCAATGGAAGGAAGGCGGAGGAGGAAGCGCAAGTGGAAGGACTTCTTCCACAGGCTAATGACGGAGGTCATCGAGAAGCAGGAGGATCTTCAGAAGAGGTTCCTCGAAGCCGTGGAGAAGCGAGAGCGTGATCGCATGGCCAGGGAGGAATCTTGGAGGCTAGAAGAGATGCAAAGGATTAATAGAGAGAGGGAGATTCTCGCTCAGGAACGCTCCATTGCCGCCGCCAAAGACGCCGCCGTCATGTCATTCTTGCAGAAGATTGCCGAACAGCACAATCTAGGACAAGCATTGAATAATACGATCAGCATTGTGCAACCACAGCCACAACCACAACCACAACCGCAACCGCAATCACAACCAAATGCACCACAGATTCCTCCAGTACCGGTGCAACAACCTATCCCAGTAACGCAGGTTGCTGTTGCACCGGTTGCCGCTCAGCCTGTGGCACCGTCAGCACCGACAGTACCACAGCAGCAACAAGTAGTGACAAGTATGGAAATCGTGAAAAGTGCTGACAATAACAATGGCGAGAAGTCGATCGGCGGAAGCTCGTCGAGGTGGCCAAAGGTGGAGGTCGAAGCGTTGATACGGCTGAGGACAAGCATGGACGCCAAGTACCAAGAAAACGGGCCAAAGGGGCCGTTATGGGAAGAGATCTCATCATCAATGAAGAAGCTCGGGTACAACAGAAACGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAATACTTCAAGAAAGTCAAAGAGAGCAACAAGAAGAGGCCAGAAGATTCCAAGACTTGCCCCTACTTTCACCAGCTCGACGCTCTCTACAGGGAGAAGAACAAGCTGGATATGGTGAAATTAAATCCTGTTAATTTGATAAATATTGTGCGTAAATAA 1602 0.5044 MLGDSALLGGGGSSGGASDDAVAAAAAVAASGGGGGSNNSGDDERGRNIEEGGSSFGGNRWPRQETLALLRIRSDMEAAFREASVKGPLWEQVSRKMAELGYQRSSKKCKEKFENVYKYHKRTKEGRTGKSDGKTYRFFDQLEALENQSQTTLLHHQSPKPTPMPPPPPPPPPPPPPPPTTTHVTVPSTTIIPSYQTTPPPQPTNPTTLLFPSSSTTTIPTDLLSNSTSSSTYSDESMEGRRRRKRKWKDFFHRLMTEVIEKQEDLQKRFLEAVEKRERDRMAREESWRLEEMQRINREREILAQERSIAAAKDAAVMSFLQKIAEQHNLGQALNNTISIVQPQPQPQPQPQPQSQPNAPQIPPVPVQQPIPVTQVAVAPVAAQPVAPSAPTVPQQQQVVTSMEIVKSADNNNGEKSIGGSSSRWPKVEVEALIRLRTSMDAKYQENGPKGPLWEEISSSMKKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKLDMVKLNPVNLINIVRK* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2783 533 SUPERFAMILY beta-sandwich domain of Sec23/24 342 398 - -
Ahy9g2783 533 ProSiteProfiles Myb-like domain profile. 423 481 IPR001005 -
Ahy9g2783 533 ProSiteProfiles Myb-like domain profile. 59 117 IPR001005 -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 341 367 - -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 344 367 - -
Ahy9g2783 533 Gene3D - 425 486 - -
Ahy9g2783 533 Gene3D - 61 122 - -
Ahy9g2783 533 SMART sant 57 119 IPR001005 -
Ahy9g2783 533 SMART sant 421 483 IPR001005 -
Ahy9g2783 533 CDD GT1 423 488 - -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 208 235 - -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 149 245 - -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 159 183 - -
Ahy9g2783 533 SUPERFAMILY Formin homology 2 domain (FH2 domain) 168 176 - -
Ahy9g2783 533 CDD GT1 59 124 - -
Ahy9g2783 533 Pfam Myb/SANT-like DNA-binding domain 423 510 IPR044822 -
Ahy9g2783 533 Pfam Myb/SANT-like DNA-binding domain 59 145 IPR044822 -
Ahy9g2783 533 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 521 - -
Ahy9g2783 533 MobiDBLite consensus disorder prediction 1 61 - -
Ahy9g2783 533 PANTHER - 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2783 Ahy-Chr9 116855457 116858653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2783 56 517 Trihelix Transcription Factor Family AT1G76880 56.965 3.21e-162 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy9g2783 Myb_DNA-bind_4 6.50E-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2783 - - ahf:112712434 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2813 19 150149455 150152687 Ahy9g2783 9 116855457 116858653 hybridization
Ahy15g3658 15 159398126 159401439 Ahy9g2783 9 116855457 116858653 PCT
Ahy5g3239 5 114384639 114388103 Ahy9g2783 9 116855457 116858653 PCT
Ahy9g2783 9 116855457 116858653 Ahy15g3658 15 159398126 159401439 PCT
Ahy9g2783 9 116855457 116858653 Ahy5g3239 5 114384639 114388103 PCT