Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2778 ATGGAGAATTCAAGGCCCAATGACACACCACTTGTGACTTCCATTATTCATGCAGCCTCGTCGGAGTTGTCGCCAATCAGTAACGGCGGCAACGGACGACAAATAATGAAGCTTGTTATCAATGGCGACAGCCACACACAAGCTCATTTAGGTCAAGTAATTACCCACTACTTGGCCTCACTACAACCTCACAGGCAACGCTTTCTAGGGTACCCGACGAATGAGGAATTCAACTACGAGGCTCTGGCTCCATTGCTTCATCTTCATCTTAACAATGCAGGGGATCCGTTTCATGGGAGCAGCTTCACTCTGAATTCAACAAGTTTCGAGGTGAGTGTGCTTGATTGGTTCGCTAACTTGTGGGACATAGAGAAGAATGAATATTGGGGATATGTCACCACTGGTGGTACTGAAGGCAATCTCCACGGCCTCTTACTTGGGAGAGAACAATTTCCGGATGGGATTCTATATGCCTCCCAAGATTCCCATTATTCTGTATTTAAGATAGCAAGAATGTACAGAATGCAATGTATCAAGGTTGCAAGTTTGATCTCCGGCGAGATTGATTGCCATGATCTCAAGGCTTTGCTACTTGCTAACAAACACAAACCCGCCATTATCAATCTTAATATAGGGACAACAATGAAAGGAGCTGTTGATGATATTGATCTTGTAATAAAAATACTTGACAAAGCTGGTTTCAGTCGTGATCGATTCTATATTCACTGTGATGGAGCTCTGTTTGGAATCATGCTTCCTTTTCTCAAATCAGGAGGACCAAAGATAACATTCAAGAAACCCATTGGAAGCATAACAATTTCTGGACACAAGTTCTTGGGATGCCCAATTCCTTGTGGCGTTGTAATAGCTCGTTTAAATTACATAAATGCCCTATCAAGAGACATAGGATACATTGCATCAAGGGATGCAACAATCACAGGTAGCCGCAGTGGCCATGCTCCAATCTTCCTTTGGTATAATCTGCAGAAAAAGGGCATAATGGGAATCAAGAATGAAGTTGAAAATTGCATAAGGAATGCACGTTACTTAAAGGATCAACTGGGAGATGCTGGAATTGGAGCAATGCTGAATGAGTTTAGTAACACGGTTGTGTTTGAGAAGCCTCTTGATGATGAGTTTGTGAGTAGGTGGAGTTTGGCTTGCAATGGAAACATCGCACATGTTGTTGTGATGCAACATGTTACCATTCAAATGTTGGATTCTTTTGTTGCTGAATTGGTTCACAACAGATCCATTTGGTTCCAAGAAGATGGGATCAGAAAGTCTCTGTGCATTGCAGATGAAGTTGGTGCTGTAAATTGTTCTTGCGCATTGCATAAGGCTAATATGGATATTCAACCCAACAACTATGCTCTGCAACAAATCAAACAAAATGTGTAG 1401 0.4211 MENSRPNDTPLVTSIIHAASSELSPISNGGNGRQIMKLVINGDSHTQAHLGQVITHYLASLQPHRQRFLGYPTNEEFNYEALAPLLHLHLNNAGDPFHGSSFTLNSTSFEVSVLDWFANLWDIEKNEYWGYVTTGGTEGNLHGLLLGREQFPDGILYASQDSHYSVFKIARMYRMQCIKVASLISGEIDCHDLKALLLANKHKPAIINLNIGTTMKGAVDDIDLVIKILDKAGFSRDRFYIHCDGALFGIMLPFLKSGGPKITFKKPIGSITISGHKFLGCPIPCGVVIARLNYINALSRDIGYIASRDATITGSRSGHAPIFLWYNLQKKGIMGIKNEVENCIRNARYLKDQLGDAGIGAMLNEFSNTVVFEKPLDDEFVSRWSLACNGNIAHVVVMQHVTIQMLDSFVAELVHNRSIWFQEDGIRKSLCIADEVGAVNCSCALHKANMDIQPNNYALQQIKQNV* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2778 466 PANTHER - 44 447 - -
Ahy9g2778 466 SUPERFAMILY PLP-dependent transferases 52 414 IPR015424 -
Ahy9g2778 466 Gene3D Aspartate Aminotransferase, domain 1 329 417 IPR015422 GO:0003824
Ahy9g2778 466 Gene3D - 87 328 IPR015421 GO:0003824
Ahy9g2778 466 Pfam Pyridoxal-dependent decarboxylase conserved domain 107 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy9g2778 466 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2778 Ahy-Chr9 116782335 116786282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2778 168 352 Calmodulin-binding Proteins AT1G65960 28.061 1.86e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2778 K25193 - gmx:100781665 613.994