Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2744 ATGTACCAGCCTTCCTCTTCCTCCTCCTCTTCTTCTCAGGCACACAACTCAACCGTTTCTGAACCAGCTTTGACCCGCTACGGTTCAGCCCCTGGCTCTCTCCTCCGCACAGCCGTCGATGCTGTCATAGCCGGAGGGGCTGGAGGCCCCCGACATCCTCATCCTCTCATGCCTACGGGATCCCACTACTTCTCCGGGGAGTCCTCCGAGTCCACCTCCAAAGTCAACGACAGTTCCAAAGATCATAACCTTCACAGATCGTACGGACTTCAGCAGGACGCCTTCGCCGGATCCTCCTCTTCCTCTTCCTCCTTGCTCCGCCAGAGAAGCTCCCCCGCCGGCTTCCTCTCCCACCTTGCTGACAATGCTGGTACCGAAAGGGGAGGTGGAGGGGGAGGCGGGGGTGGGTTCACGATCACAAGAGGGGGTGGCAGCAGCGGAGGAGGAAACTACGGCTCTAACAGTGGGAGGTTGAAGTCTCAGATGAGCTTCACCGGGCAAGACTCTCTCTCTCAGATATCAGAGGTAAGCGAGAGTGTTGTGGTGGATGCATCCACTTCTGAGCGTGCTTATGCAATGGACCACTGCTGGGACAACTCTAACTCCAACTCCAGCTCCATTGTCTTCTCCGCCCCGCCCTCCAAACGCTCCAAAAATATTGACGGTGACATCCTAAATTGTCTCACTGCCTTAGACTCTCAGTATAGTCTGCCACAAACTGCTCTTGAAATGGCAACAATGGAGAAGCTAATGCACATTCCTGAAGACTCTGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCCACTCACCCTCGCAGCATTGCAGAACGGGAGAGAAGAACTAGAATAAGTGGTAAGCTGAAGAAACTGCAGGAACTTGTACCCAATATGGATAAGCAAACAAGCTATGCAGACATGCTAGATTTGGCAGTTCAACATATTAAAGGTCTTCAAACTCAAGTCCAGAAGCTTCACACTGAACTTGACAATTGCACTTGTGGATGCAAACCAAGCTCATAA 1023 0.5259 MYQPSSSSSSSSQAHNSTVSEPALTRYGSAPGSLLRTAVDAVIAGGAGGPRHPHPLMPTGSHYFSGESSESTSKVNDSSKDHNLHRSYGLQQDAFAGSSSSSSSLLRQRSSPAGFLSHLADNAGTERGGGGGGGGGFTITRGGGSSGGGNYGSNSGRLKSQMSFTGQDSLSQISEVSESVVVDASTSERAYAMDHCWDNSNSNSSSIVFSAPPSKRSKNIDGDILNCLTALDSQYSLPQTALEMATMEKLMHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHTELDNCTCGCKPSS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2744 340 CDD bHLH_AtbHLH_like 273 325 IPR045239 -
Ahy9g2744 340 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 333 - -
Ahy9g2744 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 331 IPR036638 GO:0046983
Ahy9g2744 340 SMART finulus 274 324 IPR011598 GO:0046983
Ahy9g2744 340 MobiDBLite consensus disorder prediction 1 24 - -
Ahy9g2744 340 MobiDBLite consensus disorder prediction 116 165 - -
Ahy9g2744 340 Pfam Helix-loop-helix DNA-binding domain 273 319 IPR011598 GO:0046983
Ahy9g2744 340 Gene3D - 269 334 IPR036638 GO:0046983
Ahy9g2744 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Ahy9g2744 340 MobiDBLite consensus disorder prediction 44 84 - -
Ahy9g2744 340 MobiDBLite consensus disorder prediction 143 165 - -
Ahy9g2744 340 PANTHER TRANSCRIPTION FACTOR BHLH129 26 333 - -
Ahy9g2744 340 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2744 Ahy-Chr9 116349897 116353779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2744 24 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 48.619 1.86e-85 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g2744 HLH 4.60E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2744 - - ahf:112776078 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2869 19 151115629 151119761 Ahy9g2744 9 116349897 116353779 hybridization