Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g2740 | ATGGATCGCAAAAGGGGACGGCACGAACATCCTTTCAACGGCACCGGCAATGGCGCCTCCAAGAAATTCAGGCCACCTTCAGCTTCAGAAATGGAGTCTTTTCCAACTGGTTTAGGAAGCAAATTGAAGCCTTGCACAAAGTTTTTCAGCACCTCTGGCTGTCCATTTGGTGAGGGATGCCATTTCTTGCATTATGTTCCTGGTGGCATCAAAGCCGTTCAAATGATGAATGCTGGTAGCAACCCTGCTCTTCCTCAAGTTAGTAGAACACCACCTGTTCCTCCATCTTTCCCGGATGGGTCTTCTCCTCCAATGGTTAAAACCAGATTGTGCAACAAGTATAATTCAAGCGAAGGTTGCAAATTTGGTGACAAATGTCACTTTGCTCATGGTGAGTGGGAGATTGGCAAGCCTACAATGCCTTCATATGAAGACAGACAAAGGATTGGTGGGCGAGTTGAGACTCCAGTTCATGGAGCTGCTGCTGGCTTTGGCGCCTCAGCTACCGCTAAGATTAGTATCAATGCTTCCCTTGCTGGGGCTGTTATTGGGAAAAATGGTATCAACTCGAAGCAAATCTGTCGTGTAACAGGAGCAAAACTTTCTATCAGGGAACATGATTCTGATCCTAACCTTAAAAACATTGAGCTTGAAGGAAGTTTTGATCAGATCAAACAAGCAAGTTCCATGGTCCATGAACTTATTCTGAATGTTAGTTCGGCTGCTGGACCTGCAAAGAAGAATGTCACTTCATATGGTCCTGGTTCAAACAACTTCAAAACCAAGATATGTGAAAAATTTTCAAAAGGCTCCTGCACTTTCGGGGAGAAGTGCCACTTTGCCCATGGAATAGAAGAATTACGCAAGAGTGGAATGTGA | 879 | 0.4494 | MDRKRGRHEHPFNGTGNGASKKFRPPSASEMESFPTGLGSKLKPCTKFFSTSGCPFGEGCHFLHYVPGGIKAVQMMNAGSNPALPQVSRTPPVPPSFPDGSSPPMVKTRLCNKYNSSEGCKFGDKCHFAHGEWEIGKPTMPSYEDRQRIGGRVETPVHGAAAGFGASATAKISINASLAGAVIGKNGINSKQICRVTGAKLSIREHDSDPNLKNIELEGSFDQIKQASSMVHELILNVSSAAGPAKKNVTSYGPGSNNFKTKICEKFSKGSCTFGEKCHFAHGIEELRKSGM* | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g2740 | 292 | ProSiteProfiles | Type-1 KH domain profile. | 167 | 231 | - | - | |
Ahy9g2740 | 292 | PANTHER | KH DOMAIN CONTAINING RNA BINDING PROTEIN | 12 | 291 | - | - | |
Ahy9g2740 | 292 | SUPERFAMILY | CCCH zinc finger | 258 | 288 | IPR036855 | GO:0046872 | |
Ahy9g2740 | 292 | Gene3D | - | 100 | 137 | - | - | |
Ahy9g2740 | 292 | Gene3D | - | 258 | 290 | - | - | |
Ahy9g2740 | 292 | ProSiteProfiles | Zinc finger C3H1-type profile. | 105 | 133 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 259 | 283 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 107 | 132 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | Gene3D | K Homology domain, type 1 | 161 | 257 | IPR036612 | GO:0003723 | |
Ahy9g2740 | 292 | ProSiteProfiles | Zinc finger C3H1-type profile. | 39 | 67 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | SUPERFAMILY | Eukaryotic type KH-domain (KH-domain type I) | 163 | 238 | IPR036612 | GO:0003723 | |
Ahy9g2740 | 292 | Pfam | RNA-binding, Nab2-type zinc finger | 44 | 64 | - | - | |
Ahy9g2740 | 292 | Pfam | KH domain | 170 | 232 | IPR004088 | GO:0003723 | |
Ahy9g2740 | 292 | SMART | kh_6 | 166 | 236 | IPR004087 | GO:0003676 | |
Ahy9g2740 | 292 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Ahy9g2740 | 292 | SMART | c3hfinal6 | 105 | 132 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | SMART | c3hfinal6 | 258 | 284 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | SMART | c3hfinal6 | 39 | 66 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | SUPERFAMILY | CCCH zinc finger | 103 | 135 | IPR036855 | GO:0046872 | |
Ahy9g2740 | 292 | ProSiteProfiles | Zinc finger C3H1-type profile. | 258 | 285 | IPR000571 | GO:0046872 | |
Ahy9g2740 | 292 | CDD | KH-I | 171 | 232 | - | - | |
Ahy9g2740 | 292 | SUPERFAMILY | CCCH zinc finger | 40 | 65 | IPR036855 | GO:0046872 | |
Ahy9g2740 | 292 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 | 12 | 291 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g2740 | Ahy-Chr9 | 116282384 | 116286132 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Ahy9g2740 | KH_1 | 1.00E-09 | CL0007 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g2740 | - | - | gmx:100792652 | 466.463 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g2874 | 19 | 151213519 | 151217145 | Ahy9g2740 | 9 | 116282384 | 116286132 | hybridization |