Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2694 ATGCCATTTCGAGCTCGCACTGCAATCTTCCGTTGGTCTCTGCATACTGTTCCTTACCGTATCCATCACCATCAACCTCATTCTATTCACTCTTCTTCTTCTTCCATTCCCCACAAGTTCACTTCTTTAGCCCAAACTCAGGTTTATGGCGAATCTGTTGAAACAAGTGACGATGATGGATTTTTGTCATGGTTGGAGCGGAAAGCTGGTTGTAGAATTTCTTCATCGCTTTCAATTGGTAAATCTTCATATGGCAGGTCTCTGTTTGCTTCTAAGGCGATAAAAACCGGAGATTGTATTTTGAAGGTTCCTTATAGAGTGCAAATAACAGCAGATAATCTCCCTGCTAAGATCAAATCTCTGATCAGTGAGGAAGTTGCGAATGTTGCAAAACTTGCTGTTCTTCTTCTAATTGAGCGGAAATTGGGTCAGGACTCCCAGTGGAATCCTTATATCTGCCGTCTACCATGGCAAGAGGAGTTGCATAACACGATTTTTTGGAATGAAAGTGAGCTGGAGATGATTCATCGAAGCTCGGTTTATTGGGAAACAATTAACCAAAAGTCTCAAATTGAAAGGGACTTCTTGGCAATCAGACCTATTTTTGAATGTTTCAGTCAAAGTTTTGGAGATATTACTTATAAAGACTTCATGTATGCATGCACACTAGTTGGTTCTCGAGCATGGGGAAGCACCAATGGTTTATCTCTGATTCCTTTTGCAGATTTTGTAAACCATGATGGGAATTCAGAAGCAATTGTGATGAGTGATGATGACAAACAATTATCAGAAGTTATCTCTGATCGTGACTATGCGCCTGGGGAGCAGGTACTGATAAGATATGGAAAGTTTTCAAATGCTACATTGATGTTAGACTTCGGTTTTACAGTCCCCTACAACATTTATGACCAGGTTCAGATCCAGTTAGATATACCTAAGCATGATCCTCTGCACAAGATGAAGTTGGAACTCATGCAACAATACTTCGTGCCTTCAAGGAAAAACGCGGAAAACTTGAAACATTCTTGGAACATCTTCACAATCAAGGAGGTCAAGTGGCCTAAAGGAAAAGGGAAAGGTCTTCCACAATCGCTTCGTGCTTTTGCTCGTGTTCTTTCTTGTACTAATCGTCAAGAACTTGATGATCTGGTTGTGGAAGCTGCACAAACTGATGGTAGGCTAGGTAGGCGTCCGTTACCGGATGTCAACAAAGAGATTCAAGCCCACCTGATGTTATCGTCATTAATCGGCCAATTAATTGAGGAGCGCAGTGCAGCCATTATGTCATTGGAGGAGTCTTCCAATTCTTCATCATTTTGTGTAAGAGTTCCTGTTAGAAGATTCATGGCCCGGGATCTCCTATGCGGCGAACTTCGCATTCTGAATTCTGCTTTTACATGGCTGGAGAACTACTGTTTGTCGTCGACTTAA 1431 0.4172 MPFRARTAIFRWSLHTVPYRIHHHQPHSIHSSSSSIPHKFTSLAQTQVYGESVETSDDDGFLSWLERKAGCRISSSLSIGKSSYGRSLFASKAIKTGDCILKVPYRVQITADNLPAKIKSLISEEVANVAKLAVLLLIERKLGQDSQWNPYICRLPWQEELHNTIFWNESELEMIHRSSVYWETINQKSQIERDFLAIRPIFECFSQSFGDITYKDFMYACTLVGSRAWGSTNGLSLIPFADFVNHDGNSEAIVMSDDDKQLSEVISDRDYAPGEQVLIRYGKFSNATLMLDFGFTVPYNIYDQVQIQLDIPKHDPLHKMKLELMQQYFVPSRKNAENLKHSWNIFTIKEVKWPKGKGKGLPQSLRAFARVLSCTNRQELDDLVVEAAQTDGRLGRRPLPDVNKEIQAHLMLSSLIGQLIEERSAAIMSLEESSNSSSFCVRVPVRRFMARDLLCGELRILNSAFTWLENYCLSST* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2694 476 ProSiteProfiles SET domain profile. 69 282 IPR001214 GO:0005515
Ahy9g2694 476 PANTHER OS01G0976450 PROTEIN 51 470 - -
Ahy9g2694 476 Gene3D - 298 471 IPR036464 -
Ahy9g2694 476 Pfam Rubisco LSMT substrate-binding 313 461 IPR015353 -
Ahy9g2694 476 Gene3D set domain protein methyltransferase, domain 1 57 296 - -
Ahy9g2694 476 SUPERFAMILY SET domain 59 300 IPR046341 -
Ahy9g2694 476 Pfam SET domain 85 282 IPR001214 GO:0005515
Ahy9g2694 476 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 51 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2694 Ahy-Chr9 115813926 115820382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2694 60 275 NAC Transcription Factor Family AT3G56570 24.554 7.96e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy9g2694 SET 7.10E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2694 K19199 - gmx:100818002 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2927 19 151980587 151986910 Ahy9g2694 9 115813926 115820382 hybridization