Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g2645 | ATGATGACGTGGACCATCAAGAGAGAAAGAGAGCCTGAAAGCATAGCCATGGCCAACTATCTCATGCTGCTTTCTGGTGGTGCAGGACTTGAGAGAACCACCACCACCACCACCAGCAACAACCGTGTATTCGAGTGCAAGACATGTAACAGGCAATTCTCGTCGTTTCAGGCACTGGGAGGCCACCGTGCAAGCCACAAGAAGCCGAGGCTCATGAACGGAGAAGACAGCAGCAGTGATGATAGCCATGGCTCTCCGGCAAAGCCTAAGACTCACGAGTGCTCCGTTTGCGGCTTGGAGTTCGCCATTGGCCAAGCTTTGGGTGGCCACATGAGGCGTCACAGAACAGCACCGCCACCACCACCGCCGCCACCTTCTTCAGACGTGACTAGCAATAATAAAAGAAAGAGAGAAGTTATGTTTGTGGATCTGAACTTGACTCCCTTTGAGAATGATTTGGCATTCTTGAAGATTGGACAACCAACAATAACTACTCATCCTCCTAACTTGGTCCATTGTTTGTAA | 525 | 0.5029 | MMTWTIKREREPESIAMANYLMLLSGGAGLERTTTTTTSNNRVFECKTCNRQFSSFQALGGHRASHKKPRLMNGEDSSSDDSHGSPAKPKTHECSVCGLEFAIGQALGGHMRRHRTAPPPPPPPPSSDVTSNNKRKREVMFVDLNLTPFENDLAFLKIGQPTITTHPPNLVHCL* | 175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g2645 | 174 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 94 | 114 | IPR013087 | - | |
Ahy9g2645 | 174 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 92 | 119 | IPR013087 | - | |
Ahy9g2645 | 174 | SUPERFAMILY | beta-beta-alpha zinc fingers | 42 | 114 | IPR036236 | - | |
Ahy9g2645 | 174 | Gene3D | Classic Zinc Finger | 41 | 114 | - | - | |
Ahy9g2645 | 174 | Pfam | C2H2-type zinc finger | 92 | 116 | - | - | |
Ahy9g2645 | 174 | Pfam | C2H2-type zinc finger | 43 | 69 | - | - | |
Ahy9g2645 | 174 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 46 | 66 | IPR013087 | - | |
Ahy9g2645 | 174 | MobiDBLite | consensus disorder prediction | 59 | 92 | - | - | |
Ahy9g2645 | 174 | SMART | c2h2final6 | 92 | 114 | IPR013087 | - | |
Ahy9g2645 | 174 | SMART | c2h2final6 | 44 | 66 | IPR013087 | - | |
Ahy9g2645 | 174 | PANTHER | ZINC FINGER PROTEIN ZAT12 | 16 | 153 | - | - | |
Ahy9g2645 | 174 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 44 | 71 | IPR013087 | - | |
Ahy9g2645 | 174 | MobiDBLite | consensus disorder prediction | 108 | 133 | - | - | |
Ahy9g2645 | 174 | MobiDBLite | consensus disorder prediction | 68 | 88 | - | - | |
Ahy9g2645 | 174 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 16 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g2645 | Ahy-Chr9 | 115427190 | 115428042 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g2645 | 6 | 156 | C2H2 Transcription Factor Family | AT2G37430 | 44.970 | 4.21e-36 | 122 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy9g2645 | zf-C2H2_6 | 1.00E-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g2645 | - | - | pvu:PHAVU_008G014600g | 195.282 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g2977 | 19 | 152487453 | 152488260 | Ahy9g2645 | 9 | 115427190 | 115428042 | hybridization |