Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2641 ATGATCCAAATGATAGAATGGCAGAAGCAGTTACAGAATAATGAGAAGGCAGATCGTACTAACAACAATATGGTGTTTGTGAAGGTTATGACTGATGAACAGTTAGAGACTCTGAGGAAGCAGATTGCGGTTTATGCCACTCTCTGCGACCAGCTCGTTGAGATGCATAGAACACTCTCCACTCACCACGATCTTGCAGGAGTTCGGGTGGGGAATATATACTGCGATTCATTGATGACATCAGCAGGGCAGAAAATAACGTCTAGGCAAAGGTGGACACCAACACCATTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAGAAGATTAAAGAGATTACTTCTGAACTTAGCCACCATGGCCAGATTTCTGAAACAAATGTATACAATTGGTTCCAAAACAGGCGTGCAAGATCAAAGAGGAAGCTTCAAAATAATGTGCCACATACTACTATTGAACCAGAAGTAGATGCTGAGGTTGATTCTAAGGATAAGAAGACAAGGCCAGAGGAGTTAATTGATTCCCAACAACAACAACATAGTACCATCATGATGACCAATGCTTCTGCTGCTAATCGGTCAGAAAAGTTGTGCTTTCAAAACCCTGAGTTGCAGTATTTGAATAATCAACATCCAAACAAGAACAACAAATCAGATCCCATTTTCACATCAGATGGCACTCTAAGACCCTTAAGGAATTTTAGTCGTATGCCTGTTTTTGATGATGTTCTATCAAACTCAAGGGGAGATTATCTAGATGGAAAAATGGAAGTAGGTGGAATGTATAATTTATATCAGCAAGGAGGAGACTACAACTTGGGGGGTTGA 852 0.4073 MIQMIEWQKQLQNNEKADRTNNNMVFVKVMTDEQLETLRKQIAVYATLCDQLVEMHRTLSTHHDLAGVRVGNIYCDSLMTSAGQKITSRQRWTPTPLQLQILERIFDQGNGTPSKEKIKEITSELSHHGQISETNVYNWFQNRRARSKRKLQNNVPHTTIEPEVDAEVDSKDKKTRPEELIDSQQQQHSTIMMTNASAANRSEKLCFQNPELQYLNNQHPNKNNKSDPIFTSDGTLRPLRNFSRMPVFDDVLSNSRGDYLDGKMEVGGMYNLYQQGGDYNLGG* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2641 283 PANTHER - 4 281 - -
Ahy9g2641 283 SUPERFAMILY Homeodomain-like 87 152 IPR009057 -
Ahy9g2641 283 ProSiteProfiles 'Homeobox' domain profile. 85 150 IPR001356 GO:0003677
Ahy9g2641 283 MobiDBLite consensus disorder prediction 148 189 - -
Ahy9g2641 283 CDD homeodomain 89 150 IPR001356 GO:0003677
Ahy9g2641 283 MobiDBLite consensus disorder prediction 162 181 - -
Ahy9g2641 283 Pfam Homeodomain 89 149 IPR001356 GO:0003677
Ahy9g2641 283 PANTHER WUSCHEL-RELATED HOMEOBOX 13 4 281 IPR044559 GO:0003700
Ahy9g2641 283 Gene3D - 90 157 - -
Ahy9g2641 283 SMART HOX_1 87 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2641 Ahy-Chr9 115391460 115393917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2641 4 283 Wox Gene Family AT4G35550 47.315 5.58e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy9g2641 Homeodomain 1.40E-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2641 - - ahf:112777216 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g2982 19 152517452 152519929 Ahy9g2641 9 115391460 115393917 hybridization