Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2629 ATGGGCGAAATGCAAAGCGCGGTTTTTGGCGCTAAAAAGCCAAAGTATAAAAAATGTGAAAGTGAAGAAGAAAGTGGAAAATTGGGAGAGGGAAGCAGCACATCGCAGGGGCAGAGAGTCGACGCAGTTGAATCTCGATCCTCGTCGGTTATTGTTCGCGGCAGGGATGGCAGCGCTTTCGTCAAATGCCAAGACTGCAAAGAGGACGTTCCTGTTGGACTTGTCAGCATGCATGGTTGCAGCGACGAAGCCAAAACTAAAATGAATCTCGAGACACAACTTGTGGAACGGCCTTATGAAGCTAAGAGACCAGTGAGGAAGAAGACAAGATCTGATGTACCAAAGGCTAAAAGGGCCAAAGTTGAGAAGACGAAGAAGGTGAAAGATCCACACGTGCCAAAGAAGCCTCCAGCAGCATCCTTCTTTCTCTTCATGGATGATTTTGAGAAATCTTTTAAGGAGGCAAATCCTGATTCAAAGGATGGTAACAGGGTTTTTAAAGAGGCTCGTGCCAAATGGAGGTCCATGACTGCTGAAGAGAAGAAGCCTTATTCTGATAAACTTGCTGAACTTAAAGCAGAATATGAGAAGGCTATGGAAATTTACAATGCTGCTGAAGCAGAAGGAGAAGAGGGAGAAGGTGAAGGAGAGCATGAAGAGGGGACTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGGGGATGATGAACAATCTGATAAAGAAGCTGCTGCAGGTGAAGAGGGGGCTGATGAACAATCTGATAAAGAAGAAGCTGCTGCAGGTGAAGAGGAGGAGCTGAATGATGAGGACTAA 825 0.4582 MGEMQSAVFGAKKPKYKKCESEEESGKLGEGSSTSQGQRVDAVESRSSSVIVRGRDGSAFVKCQDCKEDVPVGLVSMHGCSDEAKTKMNLETQLVERPYEAKRPVRKKTRSDVPKAKRAKVEKTKKVKDPHVPKKPPAASFFLFMDDFEKSFKEANPDSKDGNRVFKEARAKWRSMTAEEKKPYSDKLAELKAEYEKAMEIYNAAEAEGEEGEGEGEHEEGTDEQSDKEEAAAGEEGDDEQSDKEAAAGEEGADEQSDKEEAAAGEEEELNDED* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2629 274 MobiDBLite consensus disorder prediction 206 245 - -
Ahy9g2629 274 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 34 227 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 115 133 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 13 27 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 95 138 - -
Ahy9g2629 274 Pfam HMG (high mobility group) box 135 203 IPR009071 -
Ahy9g2629 274 SMART hmgende2 133 204 IPR009071 -
Ahy9g2629 274 CDD HMGB-UBF_HMG-box 133 200 - -
Ahy9g2629 274 SUPERFAMILY HMG-box 120 205 IPR036910 -
Ahy9g2629 274 Gene3D High mobility group box domain 115 215 IPR036910 -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 202 274 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 254 274 - -
Ahy9g2629 274 Coils Coil 188 208 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 28 45 - -
Ahy9g2629 274 MobiDBLite consensus disorder prediction 1 49 - -
Ahy9g2629 274 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 134 203 IPR009071 -
Ahy9g2629 274 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 34 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2629 Ahy-Chr9 115321909 115323720 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Ahy9g2629 HMG_box 2.20E-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2629 K25507 - aip:107619373 329.717