Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2594 ATGTCGTCCGGCGAGGCCGTCGTCGGCGGAGCTAAGCCGTACTTCTGTCACGTTTGCACCCGGAGAATCACCGTCTCCGACGAATCCGAGCCTTTCTGTCCGATTTGCCTCCAAGGCTTCGTTGAAGAATTCACCGATCCCAACCCTAACCCTAACGAAAACATCTCCTTCAGTTTCGGCCCCGATCCTTCCTCCGATGCTCAACTCCCCTTCCATCCTTTGTCCTTCCTCCCTTTCCTGCTCTCCTCCGCCGCCGCCGCCTCCACCACCATCGACCTCCAGAACCCTCGCATCTTCTCCAGTTCCTCCGGATCCACGCCGCGACATGAATTTATTCGATCCGATATGTTCGACCCGTTTATGTTTCTCCAGAACCACCTCCAAGGCCTTCGCGCCGACGGAGCAAATGTACAATTCGAGATCAACCACCCTTCAGACCCAGGGTTTCGCCTTCCGGCGAACATCGGCGATTACTTCCTCGGTCCCGGCCTCGAGCAGTTGATTCAGCAGCTAGCCGAGAATGATCCCAACCGTTATGGTACCCCGCCGGCGTCGAAGACCGCCGTGGAGAATCTTCCGACGGTGACGGTGGACGACGAGTTGCTGAACTCTGAGCATAACCAGTGCGCGGTTTGCCAGGACGAGTTCGAGAAGGGGTCGCAGGTGAGGCAGATGCCTTGTAAACACGTCTATCACGATGATTGCTTGCTTCCGTGGCTTCAACTACACAATTCTTGCCCTGTTTGCCGGTATGAATTGCCAACCGACGACCCTGATTATGAGAATCGGAATCGCCAGGGGGACGGTGGTGGTGATGGTTCGAGGTCTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGACGCTTCTGGGGGTAGACCTGTTCCCAGGACTTTTAGGATATCTTTGCGATACCCGTTTGGTTCGGGTGGGTCTCCGCAGGAAAGTGGCGACAGAGGATGGGAAAGTAGGCAAGAAGATTTGGATTGA 987 0.5664 MSSGEAVVGGAKPYFCHVCTRRITVSDESEPFCPICLQGFVEEFTDPNPNPNENISFSFGPDPSSDAQLPFHPLSFLPFLLSSAAAASTTIDLQNPRIFSSSSGSTPRHEFIRSDMFDPFMFLQNHLQGLRADGANVQFEINHPSDPGFRLPANIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKTAVENLPTVTVDDELLNSEHNQCAVCQDEFEKGSQVRQMPCKHVYHDDCLLPWLQLHNSCPVCRYELPTDDPDYENRNRQGDGGGDGSRSGGGGGGGGGGDASGGRPVPRTFRISLRYPFGSGGSPQESGDRGWESRQEDLD* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2594 328 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Ahy9g2594 328 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 310 - -
Ahy9g2594 328 MobiDBLite consensus disorder prediction 254 268 - -
Ahy9g2594 328 MobiDBLite consensus disorder prediction 253 328 - -
Ahy9g2594 328 CDD RING-H2_RNF126_like 208 250 - -
Ahy9g2594 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 256 IPR013083 -
Ahy9g2594 328 SMART ring_2 209 249 IPR001841 -
Ahy9g2594 328 SUPERFAMILY RING/U-box 188 257 - -
Ahy9g2594 328 Pfam Ring finger domain 207 250 IPR001841 -
Ahy9g2594 328 Pfam zinc-ribbon 13 43 IPR039525 GO:0061630
Ahy9g2594 328 PANTHER OS06G0101300 PROTEIN 9 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2594 Ahy-Chr9 114999779 115002186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2594 153 265 C3H Transcription Factor Family AT5G01980 48.673 1.44e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2594 K11982 - lja:Lj5g3v2258550.1 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3032 19 153062242 153064024 Ahy9g2594 9 114999779 115002186 hybridization