Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2568 ATGGGAGTGGATCAGAACTTTCAGGATGAGGAGGGCACCTTGGAGATAGGAATGGAATACAGAACTGTATCTGGAGTCGCTGGACCGTTGGTTATCCTTGATAAAGTTAAGGGACCCAAATTTCAAGAGATTGTTAATATTCGCTTGGGAGATGGGAGTACCCGTCGTGGACAAGTTCTGGAGGTTGATGGCGAAAAGGCTGTGGTTCAGGTTTTTGAAGGTACATCTGGAATCGACAATAAATTTACAACAGTGCAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTAGACATGCTTGGGCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGCCCACCAATATTACCCGAAGCTTACTTGGACATATCAGGAAGTTCTATCAATCCTAGTGAGAGAACCTATCCTGAAGAAATGATACAGACAGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCCCTGTTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATTTGCCGTCAGGCTGGCTTAGTCAAGCGATTGGAGAAAACAGATAATCTTCTTGAGCATGGAGGAGAAGATGACAATTTTGCTATTGTGTTTGCTGCTATGGGAGTTAACATGGAGACTGCACAATTTTTTAAACGTGACTTTGAGGAAAATGGCTCAATGGAGAGAGTGACCCTTTTCCTTAATTTGGCAAATGATCCTACAATTGAGCGTATTATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCCTATGAGTGTGGCAAGCATGTTCTTGTTATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCCAGAGAAGAGGTACCAGGAAGACGTGGTTATCCGGGTTACATGTATACCGATCTTGCAACAATTTATGAACGTGCTGGAAGAATTGAGGGTCGGAAAGGCTCTATTACACAAATTCCAATTCTAACCATGCCAAATGATGATATTACGCATCCAACTCCTGATCTTACAGGATATATCACTGAGGGACAGATTTACATTGACAGGCAGTTGCATAACAGACAGATATACCCACCAATCAATGTGCTTCCATCACTATCTCGGTTGATGAAGAGTGCCATTGGTGAGGGAATGACTAGAAAGGATCATTCTGATGTGTCCAACCAGCTATATGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTTTCATCCGAGGATCTGCTGTATCTGGAATTCTTGGACAAATTTGAGAGGAAGTTTGTCACCCAGGGAGCCTATGACACTCGCAATATCTTCCAGTCCCTAGATCTCGCATGGACTTTGCTGCGGATCTTCCCCCGAGAGCTTCTTCATCGTATTCCAGCCAAGACCCTCGATGCTTATTACAGCCGTGATGCCGGTAACTGA 1467 0.4349 MGVDQNFQDEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEHGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDAYYSRDAGN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2568 488 PIRSF V-ATPsynth_beta/V-ATPase_B 10 488 IPR022879 -
Ahy9g2568 488 Gene3D - 28 487 - -
Ahy9g2568 488 ProSitePatterns ATP synthase alpha and beta subunits signature. 368 377 IPR020003 GO:0005524
Ahy9g2568 488 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 146 377 IPR000194 GO:0005524
Ahy9g2568 488 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 19 486 IPR005723 GO:0033180|GO:0046961|GO:1902600
Ahy9g2568 488 CDD ATP-synt_V_A-type_beta_C 387 481 - -
Ahy9g2568 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 5 488 - -
Ahy9g2568 488 CDD V_A-ATPase_B 91 379 - -
Ahy9g2568 488 Hamap V-type ATP synthase beta chain [atpB]. 17 486 IPR022879 -
Ahy9g2568 488 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 5 488 IPR022879 -
Ahy9g2568 488 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 89 IPR004100 GO:0046034|GO:1902600
Ahy9g2568 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 383 IPR027417 -
Ahy9g2568 488 CDD ATP-synt_V_A-type_beta_N 19 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2568 Ahy-Chr9 114791626 114796585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2568 1 488 Primary Pumps ATPases(2) AT4G38510 95.902 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2568 K02147 - gmx:100814088 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3060 19 153376711 153381688 Ahy9g2568 9 114791626 114796585 hybridization