Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy9g2553 | ATGTCATCTCCACCAGGCCCCATTCACTTTTTCCAGATTGTTAATGAAACCAGCCTTCAAAATGGTGAATTGAGGATTCGCAGAAGTTTTGTAAGTGAACATTGGCAAGGAATATCAAGCCCGGTATTACTTGTGCTTCCTAATGGTTCCGAATGGAAGATGGACTGGGAAAAGCGTGATGCTGATGTTTGCTTTGTTCAAGGTTGGAAGAAATTTGCAGAGTTTTATTCTTTGGAAAAGGAGCAGGTTTTGATGTTCAAGTATGAAGGGAAGTCACGGTTCAATGTTATAATACTCGGTCGGAGTGGCTTGGAAAGGGAGTATCCTTTGTTGAATGGAACTCTTGAAGCTGAAGGGAGTGGTAACTCTAAAAGGCCAAACTCTCCGTTGCGAAATTCTCCTAAGAAGAGAAGAACCAACACAGAAGAAGAAGCTAGATTCAATGCATGTTCTCATAATGCAAGGCCAAGAGACAGAGATGGAAGGAGAATCTTCTCAAAATCTGAGGCTTCTAACAACGTGGAGGCACCAAAACATGCTGAAAGTAGTAGTGCTTTGGAGAGAGCCTGGGCCTTCAGTTCTCTGAATCCTTGGTTCTATCGCAGAATGAGACCAGCGTACATCAATAACTATCTTCTGTTCAGAGCAGAAGATTATGTAACAGAAGAAGAAAGAAAGGAGAATGAGTTTCTCAGTCTCTGGGTTACCGATGAGAGTAGACCATGGCATGCTAAGATCTCGAAGCATGATAGTAATGGACAGATAATGCTTACTACGGGTTGGAAGCAATTTGTAAGGGACAACAACCTGAAACTAAATGATGTTTGTGTTTTTGAGAAAACTAGAAATTCCGAAGGACTTTCATTTAGAGTTATTATCTACCGTGCCACGCAAGAATCAACCAATATTCCAGCTCAAGATGGAGCAGACCAAAGCAACCAAACCAATGTTAGAAACAGTTTTGCTGAAAGGGGCCATGAAGGAACTTCAAAAGAATACTCAAAAAATTACAAACGTCGCGGACGTGCCAGCAAATGGACTGAAGATCAGTTCACTATCACCTTAAAGCAAAGTCAGGTGAAAAGTACTGCGCACATACCTTATGGCTTTGCCAAAAAATATCTACAAAAGGCAAAAGCTTTGACACTGCAGATTGGGAACAGAATATGGGAGATTAAGCTAGACTATTATCCACATCATTGCTATGCCAGATTATCCTCGGGATGGCCCAAATTTGTTAAGGATTGTAATCTTAAGGAAGCAGATGAATGCACCTTTCAGCTGATAGATAGGGAGAACTTTGTATTTGATGTTCAACTGAATTCTAATTACTAG | 1335 | 0.409 | MSSPPGPIHFFQIVNETSLQNGELRIRRSFVSEHWQGISSPVLLVLPNGSEWKMDWEKRDADVCFVQGWKKFAEFYSLEKEQVLMFKYEGKSRFNVIILGRSGLEREYPLLNGTLEAEGSGNSKRPNSPLRNSPKKRRTNTEEEARFNACSHNARPRDRDGRRIFSKSEASNNVEAPKHAESSSALERAWAFSSLNPWFYRRMRPAYINNYLLFRAEDYVTEEERKENEFLSLWVTDESRPWHAKISKHDSNGQIMLTTGWKQFVRDNNLKLNDVCVFEKTRNSEGLSFRVIIYRATQESTNIPAQDGADQSNQTNVRNSFAERGHEGTSKEYSKNYKRRGRASKWTEDQFTITLKQSQVKSTAHIPYGFAKKYLQKAKALTLQIGNRIWEIKLDYYPHHCYARLSSGWPKFVKDCNLKEADECTFQLIDRENFVFDVQLNSNY* | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy9g2553 | 444 | SMART | B3_2 | 351 | 442 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | SMART | B3_2 | 10 | 102 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | SMART | B3_2 | 191 | 297 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | SUPERFAMILY | DNA-binding pseudobarrel domain | 193 | 296 | IPR015300 | - | |
Ahy9g2553 | 444 | CDD | B3_DNA | 351 | 440 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | Gene3D | - | 178 | 299 | IPR015300 | - | |
Ahy9g2553 | 444 | Gene3D | - | 329 | 443 | IPR015300 | - | |
Ahy9g2553 | 444 | SUPERFAMILY | DNA-binding pseudobarrel domain | 350 | 437 | IPR015300 | - | |
Ahy9g2553 | 444 | Pfam | B3 DNA binding domain | 236 | 296 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | Pfam | B3 DNA binding domain | 14 | 98 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | Pfam | B3 DNA binding domain | 351 | 438 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | ProSiteProfiles | B3 DNA-binding domain profile. | 349 | 444 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | Gene3D | - | 6 | 103 | IPR015300 | - | |
Ahy9g2553 | 444 | PANTHER | B3 DOMAIN-CONTAINING | 317 | 439 | - | - | |
Ahy9g2553 | 444 | PANTHER | B3 DOMAIN-CONTAINING | 7 | 296 | - | - | |
Ahy9g2553 | 444 | ProSiteProfiles | B3 DNA-binding domain profile. | 9 | 102 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 317 | 439 | - | - | |
Ahy9g2553 | 444 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 7 | 296 | - | - | |
Ahy9g2553 | 444 | SUPERFAMILY | DNA-binding pseudobarrel domain | 3 | 103 | IPR015300 | - | |
Ahy9g2553 | 444 | MobiDBLite | consensus disorder prediction | 135 | 162 | - | - | |
Ahy9g2553 | 444 | MobiDBLite | consensus disorder prediction | 115 | 162 | - | - | |
Ahy9g2553 | 444 | ProSiteProfiles | B3 DNA-binding domain profile. | 198 | 297 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | CDD | B3_DNA | 9 | 99 | IPR003340 | GO:0003677 | |
Ahy9g2553 | 444 | CDD | B3_DNA | 235 | 295 | IPR003340 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy9g2553 | Ahy-Chr9 | 114636753 | 114639344 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy9g2553 | 296 | 438 | B3 DNA Binding Superfamily | AT3G18990 | 26.712 | 8.48e-08 | 52.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Ahy9g2553 | B3 | 2.60E-12 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy9g2553 | - | - | ahf:112712192 | 918.302 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy19g3078 | 19 | 153550371 | 153553024 | Ahy9g2553 | 9 | 114636753 | 114639344 | hybridization |