Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2547 ATGGCAACTTGTGGAAGAGAAGGAGCCGTGAGACAGTACATAAGATCCAAGGTTCCTCGTTTGAGATGGACTCCTGAGCTTCATCGATGCTTTGTTCATGCCATTGATAGCCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGACGTTAAAGGCCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGAAGACAAGGTAGGATTTCATCAAGCCAACATAGGAACCAATCTTTTGAGGAACATGATGATGGATGTGTTGAAGAAGTGAATGATGTTAATAATAACAATAATAATCATAATCAAAACTATCATCCATGTTCACAATCCATTGGAAAAGAATCCGATTCTCTCTTCGGATACAGTAACTTCTCCCCAAAAAGGGCTAGAATAGAGAGAAACTATTCCATATCTCAGAACCTGCAATGCAGGAACCAAAGAACAGTGCCGTATCCGTACTCCTTTTATGATTATGCTTATTCAACTCAACAACAACAACATCAACCACCTCATTCCACAGTTTTCCCTATGCTGCCACCACTTCTTGGAAATTTCCTCCAGGTTACTAAATTAAATGATAGAGAGACCACTTCGGAGCCAATGACTAATAATAATAATAATAATAATAATAATAATGTACTTTTGAACATCAACAAAAACAACAACACTGAAAAGAAGGCACGTGCAGAAGAAGATGAAGATGAAGATGTAGGGAGAGAGTGTGAGTTGTCATTGTCTCTCACATTGCCAAATCCTTCACCCCAGAGAAGTAGTAATGTTTCTTCAGCCAGTGAGATCACTGAGGCTGCTATTTCTTCATCATGTTCCACTACTCTCAAACATAGGATTAATTTAGACTTGTCTCTATCCCTTTGTTGA 921 0.3974 MATCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRISSSQHRNQSFEEHDDGCVEEVNDVNNNNNNHNQNYHPCSQSIGKESDSLFGYSNFSPKRARIERNYSISQNLQCRNQRTVPYPYSFYDYAYSTQQQQHQPPHSTVFPMLPPLLGNFLQVTKLNDRETTSEPMTNNNNNNNNNNVLLNINKNNNTEKKARAEEDEDEDVGRECELSLSLTLPNPSPQRSSNVSSASEITEAAISSSCSTTLKHRINLDLSLSLC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2547 306 MobiDBLite consensus disorder prediction 209 230 - -
Ahy9g2547 306 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 175 306 - -
Ahy9g2547 306 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Ahy9g2547 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Ahy9g2547 306 Gene3D - 18 74 - -
Ahy9g2547 306 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 181 - -
Ahy9g2547 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 175 306 IPR044848 GO:0003700
Ahy9g2547 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Ahy9g2547 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 181 IPR044848 GO:0003700
Ahy9g2547 306 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Ahy9g2547 306 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2547 Ahy-Chr9 114549183 114553152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2547 1 74 G2-like Transcription Factor Family AT1G14600 73.418 3.00e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy9g2547 Myb_DNA-binding 1.20E-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2547 - - ahf:112712187 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3088 19 153630911 153634822 Ahy9g2547 9 114549183 114553152 hybridization