Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2512 ATGGACACTTCAAACCCAGCTGTATTTGTAAATGGCGAGTTGCTTCCAAAGTTCATAGGAAAGAAAGTACGAACGGTGGTTCAGGTGAATAAATGTGATGGTGTGGTCAGTGCAGCAAAATCCACAGATGATCAAGAACTAACTGTGAATGGTTTGCCACAAGTCCCTCTTATGAATTTTGTTGAAGTAATTGGTATTGCGGAAACTAATCACTCCATCAATGCTGAAATCTGGACTGACTTTGGCACCACTTTTGATACCAATTCTTACAATCAGTTATGCCAACTAGCAAATGGAGAATTCAGAAATCTGTTTCTCTAG 321 0.3956 MDTSNPAVFVNGELLPKFIGKKVRTVVQVNKCDGVVSAAKSTDDQELTVNGLPQVPLMNFVEVIGIAETNHSINAEIWTDFGTTFDTNSYNQLCQLANGEFRNLFL* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2512 106 Gene3D - 2 106 IPR012340 -
Ahy9g2512 106 Pfam Replication factor A protein 3 1 99 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy9g2512 106 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Ahy9g2512 106 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 106 - -
Ahy9g2512 106 CDD RPA3 6 105 - -
Ahy9g2512 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2512 Ahy-Chr9 114242582 114244145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2512 1 106 Core DNA Replication Machinery Family AT4G18590 59.434 2.76e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2512 K10740 - gmx:100781484 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3114 19 154013905 154015447 Ahy9g2512 9 114242582 114244145 hybridization