Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2464 ATGAGTCCGTCGGGTAAGAACGTGGCAAACGCCGTCGGTGGCAAAACGGCAAGAGCGTGCGATAGCTGCATAACGAAGCGAGCACGGTGGTACTGTGCTGCCGATGATGCTTTCCTCTGCCAAGCATGTGACTCTTCTGTTCACTCCGCTAACCCACTCGCTCGCAGGCATCAGAGGCTGCGCTTGAAAGCCGCAACTTTGGACCCTCTCAACACTACCTCTACCTGTGCACCTACGTGGCACCATGGCTTCACAAAGAAAGCTCGCACGCCCCGAAACGGTGGTAAGACCAATCATTCGTCTTCTTCAACTCGTCCAACATCCAAGTCTTGTTGGAGCAGCCGCATCAACAACCAGCAGCCTTTTCATCTGGTGCCGGAAGAGGGCGAGGGCTCCGATGAAGTGAATTCCCATGAAGAGAACGAGGAGCAGCTTCTTTATAGGGTTCCTGTATTCGATCCCTTTGTAGCCGACCTATGCAGTCCTGCTGAGAATAATACCAAGAAGGAGAGCGAAGAGAGCAAGAGCTCCTTTGGTTCTCACTTGCATGGCTTTCTTCCATCGGAAGCTGAGCTTGCTGAGTTTGCGGCTGATGTGGAGAGCTTGTTGGGTAGGGGAATGGAGAACGAGTGCGTTGGGATGGAACACCTTGGTCTTATTGATAATAATAATAATAAGGTAGTGAAGGTGGAAATGGAACAGGAACAGGAACACATGGATGCTACCTGTAGTAGTTGCAAGCTCGAGGAGGGAGATAATGACATGATGATGATGGAGATTGGAAGAGAAACGGCGTTTCAGTTGAGCTTTGACTACGACGAATCTCATGAAACTGAAGAGATAGATAAGGAGAAGGTCAATGATGATGAAGATGCAATTAATAAGAAGAGGAAGATATTGCTGCAGCTAGATTACGAGGGAGTAATCAATGCGTGGGGTGGTAGCCATAAATCTCCATGGACTACAGGTCACAAACCAAACTTGGACCTCCATGATTGCTGGCCTCATACCATGGCAACAGGGGGAACAGAGCTTCATCATTGTTATGGTGAATTGATGATTGGATTAGGGTGTAACCCATCATCGGTAATATTGGGAGACGGGGGTAGAGAGGCAAGAGTGTCAAGGTACAGAGAGAAGCGCCGAACAAGGTTGTTCTCCAAGAAAATAAGGTACGAGGTTAGGAAATTGAATGCAGAGAAGAGGCCCAGAATGAAAGGTAGATTCGTCAAGAGGGCTTCATTTGCCGCACCATTTCCGTTGATTGCTTAA 1272 0.4858 MSPSGKNVANAVGGKTARACDSCITKRARWYCAADDAFLCQACDSSVHSANPLARRHQRLRLKAATLDPLNTTSTCAPTWHHGFTKKARTPRNGGKTNHSSSSTRPTSKSCWSSRINNQQPFHLVPEEGEGSDEVNSHEENEEQLLYRVPVFDPFVADLCSPAENNTKKESEESKSSFGSHLHGFLPSEAELAEFAADVESLLGRGMENECVGMEHLGLIDNNNNKVVKVEMEQEQEHMDATCSSCKLEEGDNDMMMMEIGRETAFQLSFDYDESHETEEIDKEKVNDDEDAINKKRKILLQLDYEGVINAWGGSHKSPWTTGHKPNLDLHDCWPHTMATGGTELHHCYGELMIGLGCNPSSVILGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAPFPLIA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2464 423 Pfam B-box zinc finger 17 59 IPR000315 GO:0008270
Ahy9g2464 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 5 417 - -
Ahy9g2464 423 MobiDBLite consensus disorder prediction 80 113 - -
Ahy9g2464 423 ProSiteProfiles Zinc finger B-box type profile. 15 62 IPR000315 GO:0008270
Ahy9g2464 423 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 5 417 - -
Ahy9g2464 423 MobiDBLite consensus disorder prediction 94 113 - -
Ahy9g2464 423 CDD Bbox1_BBX-like 19 62 - -
Ahy9g2464 423 Pfam CCT motif 370 412 IPR010402 GO:0005515
Ahy9g2464 423 SMART bboxneu5 15 62 IPR000315 GO:0008270
Ahy9g2464 423 ProSiteProfiles CCT domain profile. 370 412 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2464 Ahy-Chr9 113611035 113612767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2464 6 412 C2C2-CO-like Transcription Factor Family AT1G25440 47.685 6.01e-110 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Ahy9g2464 CCT 1.40E-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2464 - - cam:101499877 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3165 19 154728782 154730546 Ahy9g2464 9 113611035 113612767 hybridization