Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2428 ATGACTCCACTTCATTTCTTGTTCTTTTCCTTCTTGTTTTCTCTCATTCTACTGATTGTTACTGCTGGGAACCATGAGAACTGTCCAAGCTCCTTTACTTGTGGAAAACTTGGGACTTTCCGGTACCCATTCACCATGGCAGAGCATCCTGAGTGTGGGTTGTTACCCATTCAAGGCTGCCTCCTCAATGCTACTTCACCTAAATTGATCCAACTTGGCAACAATAGCAAAAGCGTGAACCTTACTGCTGTAGTGGAGACCAATAAGATCATTACAATCTATGATGATGGTTTCCACACAAGTTTGGATCACAATGAATGTGATACTTTGCACAATAATTACACCCTTCCTCCACCTTCTCCACTTTTGTCTATGTATATTAAGTACAATGTAACTCTCTTCAAATGCAATCACAACCCTAGTACCAAGCCCCCTTCCAATTATGTTAATCTAGGATGCCGCGCCCACTACGGCTATGAAATCTATTATGATAGAGAAAATACCCATCCTGATCAAGAGGCTGCCGGAGTTTTTTCCGGCTGCTCGGTTGTCCAGTTTGCTTCAAAAGACTCCACCAATACCAAAGACGTTTTGTCCTTCGTTTCTGCTGAGATGGTTCTTGAAATAGTATTATCTCATGACTGTGATGACTGCTTCAATCACAGAGGAGGCCTTTGTAGACTTGACAACAATAACCACTTTTACTGCCACTTAGAGCCCAAGAGCAGTAAAGCCTTGAAGATCGGACTCGGAATAGGTTTAGGTGTTGGTGTCACCCTGCTATGCATTTTGATCCTTGTCTACTTGTTTAGACGAAAACATGCTCCTTCAGATCTTCAATACCAATCAAGAAGCACACACAGTGACTTGAATGATCTCTCTAGAAATCCAGACCCAGAAAGCGGAAGGGACTACTTTGGAGTCCCTCTCTTCTCTCACGAGGAGCTCAGTGAAGCTACAAATAATTTCCACCACTCCACCCAAGTTGGACATGGAGGCTTTGGAACCGTTTACTATGGAAAACTGCGAGATGGACGGGAAGTTGCTGTGAAGCGCCTCTATGATCACAACTACAGGAAAATGGAACAGTTTATGAACGAAATTGAGATCCTTACTGGCATGCGCCACAGAAACCTTGTGTCCCTCTATGGTTGCACCTCACGCCACAGTCGAAAATTATTGCTTGTGTATGAGTATGTTTCAAATGGAACTGTTGCTGCTCATCTCCATGGTGATTTAGCAAGGAGTGAAACACTGCCATGGAACATAAGGATGAAGATTGCCATTGAGACTGCAAGTTCATTGTCATATCTCCATGCCTCTGACATCATTCATCGTGATGTTAAAACCAATAACATTCTCCTTGACCACCATTTTTGTGTTAAGGTTGCGGATTTCGGCCTTTCAAGACTCTTCCCCAGTGATGTAACCCATGTCTCCACAGCACCACAAGGGACTCCAGGCTATGTTGACCCTGAATATTACCGCTGCTACCAGCTTACTAGCAAGAGTGATGTTTATAGTTTTGGAGTGGTGCTTGTTGAGCTTATATCTTCTAAGCCTGCTGTTGATATGGATAGGCATAAGGATGAGATTAACTTGTCTGATTTAGCCATAAACAAGATTCAAAAGAGTGCATTTAGCGAGCTGGTAGATCCTTCTCTTGGTTTTGATTTGGATAGTGAGGTAAAGAGGATGATAGTTTCCGTGGCAGAATTGGCTTTTCAGTGTTTGCAACGGGATAGGGCATTGAGGCCTTCCATGGATGAGGTTTTAAGGGCGCTGATCATTATTGAAAGTGGGAAGATTAAGGATGAAGCTGAAGAGGTAGAGGCACATGTACATACACCACCATCCCCGGATTTGAATGATGCTGCTGAAAGAATAAAGTAG 1893 0.4321 MTPLHFLFFSFLFSLILLIVTAGNHENCPSSFTCGKLGTFRYPFTMAEHPECGLLPIQGCLLNATSPKLIQLGNNSKSVNLTAVVETNKIITIYDDGFHTSLDHNECDTLHNNYTLPPPSPLLSMYIKYNVTLFKCNHNPSTKPPSNYVNLGCRAHYGYEIYYDRENTHPDQEAAGVFSGCSVVQFASKDSTNTKDVLSFVSAEMVLEIVLSHDCDDCFNHRGGLCRLDNNNHFYCHLEPKSSKALKIGLGIGLGVGVTLLCILILVYLFRRKHAPSDLQYQSRSTHSDLNDLSRNPDPESGRDYFGVPLFSHEELSEATNNFHHSTQVGHGGFGTVYYGKLRDGREVAVKRLYDHNYRKMEQFMNEIEILTGMRHRNLVSLYGCTSRHSRKLLLVYEYVSNGTVAAHLHGDLARSETLPWNIRMKIAIETASSLSYLHASDIIHRDVKTNNILLDHHFCVKVADFGLSRLFPSDVTHVSTAPQGTPGYVDPEYYRCYQLTSKSDVYSFGVVLVELISSKPAVDMDRHKDEINLSDLAINKIQKSAFSELVDPSLGFDLDSEVKRMIVSVAELAFQCLQRDRALRPSMDEVLRALIIIESGKIKDEAEEVEAHVHTPPSPDLNDAAERIK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2428 630 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Ahy9g2428 630 Gene3D Phosphorylase Kinase; domain 1 298 399 - -
Ahy9g2428 630 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 606 IPR044652 -
Ahy9g2428 630 MobiDBLite consensus disorder prediction 609 630 - -
Ahy9g2428 630 Gene3D Transferase(Phosphotransferase) domain 1 400 609 - -
Ahy9g2428 630 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 606 - -
Ahy9g2428 630 Pfam Protein kinase domain 323 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2428 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Ahy9g2428 630 SMART serkin_6 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2428 630 SUPERFAMILY Protein kinase-like (PK-like) 303 597 IPR011009 -
Ahy9g2428 630 ProSiteProfiles Protein kinase domain profile. 323 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2428 Ahy-Chr9 113184931 113187505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2428 32 626 Receptor kinase-like Gene Family AT1G25390 49.668 6.18e-171 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy9g2428 Pkinase 1.50E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2428 - - gmx:100791822 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3209 19 155213697 155216931 Ahy9g2428 9 113184931 113187505 hybridization