Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2427 ATGCAGGCTCCACACACGTATATAACCAGTTTGTGCGCTTATGTGGATCCACACTACCTGGCATGTGAACCCCAAACATGCGGCAACCAATCCATAAGATACCCCTTCTACATCCAAGGCAAGCAGCAACCGTTCTGTGGCTACCCTGGTTTTGCCATCTCTTGTGCTGGTGATATTCATGGCTTCCCAACTCTCAATCTCTCCAATACTCCTTACATCATCCATCAAATATTCTACCACAACGAATCACTCAGAGTCTCCAATGCTGCCTTCTCATCAAATACTTCTTGTATTTCTCCTACACACAACCTCACCCTTCCTCCAACCAGGACCTTCACTTTTCTTAATCAAAATCATAATAAGGACATCTTACTCTTCTTCGGATGTAATCTGTCCTCCATGCCCACAGAGTTGATGGATTACAGAATTGGGTGTTCTGGAGCGAGCAACAAAACGGGTGGTTCGGTTCTGGCATTGTATAAGGACGATGTCAACACAGTAACATCGGTCTCAAAGAGTTGCGGGAGTGGCGGAGAGGTGGTGGATGCGGTGGTGGAAGGGAGTGAAGGAGGGATGGAAGAGGAGCTGAGGAGAGGGTTCATGCTGAATTGGACAGCGAGTGATTGCAAGTTGTGCAATAGCACAGGAGGAAGGTGTGGCTTCAATTCAACTATCCTCACTTTCCAGTGTTACTGCACTGATCGAATTCATGCTTCCAAATGTGATATTACAGCCACCGGAGAGAGAAGAGAATGTCCAGCTTCATTCAATTGTGGATATGTTGGGAACATCAGCTTCCCTCTCACTACAGCAGAGCGTCAGGAGTGTGGCCTTTTGGCCATAAACAATTGTTACAAGCCAGCGCAGGAGGATAGATGGGTGCAACTAAGTGATGAAGGCAAAACATTTATAGTTATACGCGTATCTCAACAGAATTTTACCAGTATTCAATTCAGAGATAAGCACTTATACGATCTTCTGCAATCAAGAAATTGTAATGCCTTCAGATATAACTATACTCTTTCTACTCCTCCCACCTTTCATCATTTTGCTTCCCTTTATATGGAATACAATACAACCCTCCACACATGCAACCCTACTCTCCGTGTCCCCCCAACTAAGAACATGTTCCGTTATGCAAATTGCACTGACATCCATATCTATTACGGCCTTTTCAATCACACACCACAAATTCAGAAATCGTTGGCCTCATGCACAAAGGTGGTGCTTCCAATCAAAGATGTTCCTGATGGCAATGATCCATTCACATTCGTAAATGCTGATATCATCGCTAAGGTCATTTTGTCGCAAGAATGCACAGACTGTCACTATAAGCAAAGAGGCCAGTGCCAACTTGACAGCAAAAGTAAATTTTGTTGTGCCAACGTTAGGCCGCCGGAAAATACAAGTGAGACAACTTGCTTGAGAGGGAAAAAAGATCTGAGTAAGAAGGCTAAATTGGGTCTAGTAGGTTTGGGTATTGGCTTCTTAGGCATCTTGATAATTGGGTTGCTCTTGCTCTTCCGAATCTACAAGAGAAAACGTGTCAACTCAGGCAGCAGCCACTTTGAATCAAGATACTCTTATTCTGATTCCTCTTCCAATCCACACCTAGATAATGGTGCTGCTTACCTCGGAGTTCCACTCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAATTTTGACCATAACAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTACGGGAAACTCCAAGATGGAAGAGAAGTTGCTGTGAAGCGCTTGTATGAGCACAACTACAGGAGAGTAGAGCAATTCATAAATGAAGTTCAGATTCTAACACGTTTGAGACACAAAAATCTTGTGTCTCTCTACGGCTGCACTTCGCGCCACAGCCGCGAACTGCTGCTTGTATATGAATATATTTCTAATGGCACGGTTGCTTGTCATCTCCATGGAGAATCAGCCAAGCGCAGCTTACTACCTTGGTCTACAAGAATCAAAATCGCCATAGAGACTGCTACTGCATTGGCTTATCTTCATGCTTCTGACATCATTCACCGTGATGTGAAGACCAACAACATTCTCCTTGACCATAACTTTACTGTCAAGGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCATGGATGCAACCCATGTATCCACCGCGCCACAAGGGACTCCTGGTTATGTTGACCCTGAATATCACCAGAATTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGCTAATATCATCCATGCCTGCAGTTGATATGAACAGGGATAAGGATGAGATTAACTTATCAAATCTAGCCATGAAGAAGATTCAAAATAGTGCAATTATTGACTTGGTTGATCGTTCTCTCGGTTTTGATTCAGACAATAAGGTAAGGAGAATGATAGTTTCGGTGGCGGAGTTGGCTTTTCAGTGTTTGCAAAGAGACAAGGAGTTGAGACCTTCCATGGACGAAGTCTTGGATGAACTGAAGAAGATTGAGAGTGGGAAGGATCATGCAGAGCTTCAAGAGGAAGCTGATGTTGATGGTAATGAAGTTTCTCACAATAAGATTGTACATTCACTTCCACCACCTTCACCTGAATGGGATGAAGTTGGATTATTGAAGCATATGAAGATACCACCATCTTCTTCACCAATCACTGTCACTGATAATTGGGAAAGTAAATGCACCACGCCCAGCATCAGTGCTTAG 2727 0.4367 MQAPHTYITSLCAYVDPHYLACEPQTCGNQSIRYPFYIQGKQQPFCGYPGFAISCAGDIHGFPTLNLSNTPYIIHQIFYHNESLRVSNAAFSSNTSCISPTHNLTLPPTRTFTFLNQNHNKDILLFFGCNLSSMPTELMDYRIGCSGASNKTGGSVLALYKDDVNTVTSVSKSCGSGGEVVDAVVEGSEGGMEEELRRGFMLNWTASDCKLCNSTGGRCGFNSTILTFQCYCTDRIHASKCDITATGERRECPASFNCGYVGNISFPLTTAERQECGLLAINNCYKPAQEDRWVQLSDEGKTFIVIRVSQQNFTSIQFRDKHLYDLLQSRNCNAFRYNYTLSTPPTFHHFASLYMEYNTTLHTCNPTLRVPPTKNMFRYANCTDIHIYYGLFNHTPQIQKSLASCTKVVLPIKDVPDGNDPFTFVNADIIAKVILSQECTDCHYKQRGQCQLDSKSKFCCANVRPPENTSETTCLRGKKDLSKKAKLGLVGLGIGFLGILIIGLLLLFRIYKRKRVNSGSSHFESRYSYSDSSSNPHLDNGAAYLGVPLFSYKDLKEATNNFDHNKELGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFINEVQILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGESAKRSLLPWSTRIKIAIETATALAYLHASDIIHRDVKTNNILLDHNFTVKVADFGLSRLFPMDATHVSTAPQGTPGYVDPEYHQNYQLTSKSDVYSFGVVLIELISSMPAVDMNRDKDEINLSNLAMKKIQNSAIIDLVDRSLGFDSDNKVRRMIVSVAELAFQCLQRDKELRPSMDEVLDELKKIESGKDHAELQEEADVDGNEVSHNKIVHSLPPPSPEWDEVGLLKHMKIPPSSSPITVTDNWESKCTTPSISA* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2427 908 SMART serkin_6 562 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2427 908 SUPERFAMILY Protein kinase-like (PK-like) 545 838 IPR011009 -
Ahy9g2427 908 Pfam Protein tyrosine and serine/threonine kinase 565 834 IPR001245 GO:0004672|GO:0006468
Ahy9g2427 908 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 252 907 IPR044652 -
Ahy9g2427 908 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 19 243 - -
Ahy9g2427 908 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 252 907 - -
Ahy9g2427 908 MobiDBLite consensus disorder prediction 886 908 - -
Ahy9g2427 908 Gene3D Transferase(Phosphotransferase) domain 1 639 852 - -
Ahy9g2427 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 682 694 IPR008271 GO:0004672|GO:0006468
Ahy9g2427 908 Gene3D Phosphorylase Kinase; domain 1 535 638 - -
Ahy9g2427 908 MobiDBLite consensus disorder prediction 887 908 - -
Ahy9g2427 908 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 243 IPR044652 -
Ahy9g2427 908 ProSitePatterns Protein kinases ATP-binding region signature. 568 590 IPR017441 GO:0005524
Ahy9g2427 908 ProSiteProfiles Protein kinase domain profile. 562 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2427 908 Pfam Wall-associated receptor kinase C-terminal 185 234 IPR032872 -
Ahy9g2427 908 Pfam Wall-associated receptor kinase galacturonan-binding 22 87 IPR025287 GO:0030247
Ahy9g2427 908 CDD STKc_IRAK 568 837 - -
Ahy9g2427 908 Coils Coil 827 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2427 Ahy-Chr9 113174279 113183784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2427 245 908 Receptor kinase-like Gene Family AT1G25390 47.839 8.20e-177 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy9g2427 PK_Tyr_Ser-Thr 1.70E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2427 - - ahf:112712053 1776.91