LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2364	ATGGAATCGGTCCCTGGTGATGTATCAAATTTACCTCCTAGTAAAGACCCATCTCCTTCACCTCCAGTCAAAGAGACCGATGGACAAGCTTCTTCAGCTCCTGTAGCCTTTGGGCAAGATAGTTCTGCACATGTGGCACCATCTAAGCCATCCTCCACCGGGGCATCATCTTGGGCCAAAAACTTGAACATTTCTCAGCCATCTGGCTCACAAGATGACCCATCCACTGGAAATGCTGGGAAATCAACCTTTGCTCGCATAACCAGTAATTTGGGATTGCGTTTGTCACCAAAGTCTCCTCCGGCAGATGACAGTTCCAATGAGACACCAGCACAATCTAATATTTTTGGAAGTATCACAAGAGGTTTGGTTGACACTTCTAAGAATGCAGTGAAAGCTGTCCAGGTTAAGGCACGACATGTCGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATCATTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTTATTAAGTTTTTTGAGACTCACCATAAGGATAAATACAAAGTGTACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGGTTATCTCATTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGAACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTAAAGTTCTTTCCAACTGCTGAGGAGTCAATGGATTACTATAATCAGAAACGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTAGGTATGTAAAATATTTTGAACGTGTCTTCACTTACTTCAATGGCGAAAACCCACCTGCCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCACAGGTGCCCTTACTGGATCAGGCCCTCTATAACTGTCTCAGATCATAGTGGTGTGCTGTTCTCTACCAAAAAGCATCCAAGGACCAAGGATCTTTTGCCAGAAGATTTCTGGTTCAGTGCTCCAAAGAAGGGAGTAATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAATTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGACTTCTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCAGTGATCTTGATGGCTTTGACAAGAGGAAATTGCCTTCTCCAGGATTCCTGGTTGAGGTTGTGCTGGTTGATTATAATGGTAATGTTGTGGCTTCCGAACCCGAGGCCACTGGAAAAAGATCAGATGAGAGTTCAAGTAATAGTGCCACCCCTGTTGAAGCAAGCATACGGGTGCAGAATACAGACAAAGAGTCAGGGAGTCGAGATAAAGATGATGTGTTTTCAGATGGTGAGTCGGAGCATTCTGCTTCTTCAAGAAGCAAGCAAGCAAAACCAGCTTCTGAACCAGTTAAAACGGTTAACAAGGCTACCAGTGGATCTGAAACCAACAAAATTTCAAATCAAGTTGCAAATCTAACACATGCAACTGAACAAGTTTCTTTGGAAAGTGCAAGCTCGAAACCAGTTCATGCTGGTCAACCAAAAAGTGATAATGAAAGAACTGTGTCTGGTATTGAGATGGCCAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCATCTGTTTTTACATTTGGAGATGATGAAGACTACGAAAGTGATTAA	1854	0.4288	MESVPGDVSNLPPSKDPSPSPPVKETDGQASSAPVAFGQDSSAHVAPSKPSSTGASSWAKNLNISQPSGSQDDPSTGNAGKSTFARITSNLGLRLSPKSPPADDSSNETPAQSNIFGSITRGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVFTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVVASEPEATGKRSDESSSNSATPVEASIRVQNTDKESGSRDKDDVFSDGESEHSASSRSKQAKPASEPVKTVNKATSGSETNKISNQVANLTHATEQVSLESASSKPVHAGQPKSDNERTVSGIEMASSESEFKAMAADASVFTFGDDEDYESD*	618

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy9g2364	617	MobiDBLite	consensus disorder prediction	24	114	-	-
Ahy9g2364	617	Gene3D	Protein tyrosine phosphatase superfamily	132	329	IPR029021	-
Ahy9g2364	617	MobiDBLite	consensus disorder prediction	521	583	-	-
Ahy9g2364	617	MobiDBLite	consensus disorder prediction	497	520	-	-
Ahy9g2364	617	MobiDBLite	consensus disorder prediction	476	496	-	-
Ahy9g2364	617	ProSitePatterns	Tyrosine specific protein phosphatases active site.	263	273	IPR016130	GO:0016311\|GO:0016791
Ahy9g2364	617	MobiDBLite	consensus disorder prediction	1	114	-	-
Ahy9g2364	617	PANTHER	PHOSPHATASE WITH HOMOLOGY TO TENSIN	19	617	-	-
Ahy9g2364	617	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	261	300	IPR000387	GO:0016311\|GO:0016791
Ahy9g2364	617	ProSiteProfiles	Phosphatase tensin-type domain profile.	147	326	IPR029023	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2364	Ahy-Chr9	112470919	112475914	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2364	38	617	Protein tyrosine phosphatase (PTP) family	AT3G19420	69.309	0.0	832

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2364	K01110		-	gmx:100784003	1037.33

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g3274	19	155854721	155859709	Ahy9g2364	9	112470919	112475914	hybridization
	Ahy5g0606	5	7722140	7727325	Ahy9g2364	9	112470919	112475914	PCT

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