Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2308 ATGAGCTGCAATGGATGCCGTGTGCTACGAAAAGGGTGCAGCGAAGAGTGCATGCTACGACATTGCCTGGTGTGGATACAGGACAATCCACGAGCACAGGGTTACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGCGCCAACCTCATGTCTTTCCTTTCCTCCGTTCCCACCAACCACAGATCCGCATTGTTTCAGTCACTTTTATATGAGGCAGTGGGTCGTACCATAAATCCTGTGAGTGGGGCAGTGGGGCTGCTCTCGACAGGCAACTGGCATCTCTGCCAGTCCGCGGTGGACAAAGTGCTGCGAGGGGGCGGCGCCGCCTTGACGGAAAGTAGTGATCATTTGAAAGAAGCAGAATCAGAAGAGAGAATTGAATCAAAGAAGCAACCAGCCAGCAACACAACAACTACTCATCATTGGCCTTCTCAAACGACTGAAACCAAGCTGCTTACGCTTTTCTTATGA 471 0.5223 MSCNGCRVLRKGCSEECMLRHCLVWIQDNPRAQGYATLFVAKFFGRANLMSFLSSVPTNHRSALFQSLLYEAVGRTINPVSGAVGLLSTGNWHLCQSAVDKVLRGGGAALTESSDHLKEAESEERIESKKQPASNTTTTHHWPSQTTETKLLTLFL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2308 156 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Ahy9g2308 156 MobiDBLite consensus disorder prediction 114 130 - -
Ahy9g2308 156 PANTHER LOB DOMAIN PROTEIN 1 144 - -
Ahy9g2308 156 MobiDBLite consensus disorder prediction 113 146 - -
Ahy9g2308 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 144 - -
Ahy9g2308 156 MobiDBLite consensus disorder prediction 131 146 - -
Ahy9g2308 156 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2308 Ahy-Chr9 111956678 111957387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2308 1 106 AS2 family AT3G49940 73.585 9.20e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy9g2308 LOB 1.60E-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2308 - - gmx:100816269 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3330 19 156313470 156314255 Ahy9g2308 9 111956678 111957387 hybridization
Ahy5g0569 5 7152919 7154331 Ahy9g2308 9 111956678 111957387 PCT