Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2301 ATGGAGCCTGGTGAGGAAATTTATGCAGAATGGAGTTCCCTTAGTGGATCATACACAGCTGAGGAAGCTGATTTCATGAACCAGTTTCTTAGCAACTGCTCACACACACAGCAGCTACATGCAAATTTGAATGCAGGAATTCCATCTGCATTATGGTATGGTCATGCAGACATCAATAGCAGTTCATTTTATGCTGCAGATGCTTCTAACAATATGTTTCCAATTATAGATAGTGACAACTTGAATGATCCATTAACCAACTTGGTGGATCCCTCATTAAGCACATATACTGATAAAGAGTTAGGTGTAGATGTTATTGCTGATAAGAATGTACCAAGTGAACCTGTTTCTGAACCAGCCCAAGAGAATATAACCAGCAAGCTGGAGAAGCCAAGAAAAAGGTCTCGGAGTTCAAATGAGATACTAAAGAACAAGAAAAATGTTAAGACTACAAAGAAACCAAAATCTGCTTCCATTAGCAACATTAAAGAAGAAGATAGATGTCCTGGTCAGGGGGAAAACTTGAGCTGTTCCTGCTCAGAAGATGACTTGGATACGTGTCGTGAGCTAAATGAAGGAGAGTCTTCGAGCTTGAGCCTGAAAAATTCTAAAGGTCTTCAGTTAAATGGCAAATCTAGATCTAGTAGAGGTTCTGCTACTGATCCACAGAGCATCTATGCAAGAAGAAGAAGAGAAAGAATAAATGAAAGGTTGAGAATCTTACAAAACTTAGTGCCTAATGGAACCAAGGTGGATATCAGCACAATGCTCGAGGAGGCTGTCCAATATGTGAAATTTTTACAACTCCAAATTAAGCTCTTGAGCTCTGATGATCTCTGGATGTACGCTCCAATTGCTTACAATGGAATGAACATTGGACTAGACTTCAATATTACCACACCCAAACAAAACAATAATAGCAGATATATAGCATAG 936 0.391 MEPGEEIYAEWSSLSGSYTAEEADFMNQFLSNCSHTQQLHANLNAGIPSALWYGHADINSSSFYAADASNNMFPIIDSDNLNDPLTNLVDPSLSTYTDKELGVDVIADKNVPSEPVSEPAQENITSKLEKPRKRSRSSNEILKNKKNVKTTKKPKSASISNIKEEDRCPGQGENLSCSCSEDDLDTCRELNEGESSSLSLKNSKGLQLNGKSRSSRGSATDPQSIYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDFNITTPKQNNNSRYIA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2301 311 Pfam Helix-loop-helix DNA-binding domain 228 268 IPR011598 GO:0046983
Ahy9g2301 311 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 13 301 - -
Ahy9g2301 311 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 301 - -
Ahy9g2301 311 MobiDBLite consensus disorder prediction 108 175 - -
Ahy9g2301 311 MobiDBLite consensus disorder prediction 125 147 - -
Ahy9g2301 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 267 IPR011598 GO:0046983
Ahy9g2301 311 MobiDBLite consensus disorder prediction 193 222 - -
Ahy9g2301 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 284 IPR036638 GO:0046983
Ahy9g2301 311 SMART finulus 224 273 IPR011598 GO:0046983
Ahy9g2301 311 Gene3D - 216 275 IPR036638 GO:0046983
Ahy9g2301 311 MobiDBLite consensus disorder prediction 193 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2301 Ahy-Chr9 111903901 111905643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2301 6 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 39.942 1.92e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy9g2301 HLH 6.60E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2301 - - ahf:112711907 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3337 19 156358116 156359920 Ahy9g2301 9 111903901 111905643 hybridization