Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2289 ATGTCTTCTTCGTCTCCAGACCACTCCACTACCTCCGCTAGCATGCTGTGCGTCGAAGACGCCAGCGAAGCAATCTCCGACCACCCCTCTCCGCCCTCACTGGCAGCAGTCTGGCAGCCCTACGACGATGATTCCGACATCAGCGAACTCATCGACGCAGAGGCGCGGCACATGGCGTCGGCGGATTACCTCCGGCGGTGCGGCGATGGTTCGGTGGACGTGAGCGCACGGTTGGACGCCATCAACTGGATGTTAAAGGTGCAGGCATTCTATGAGTTCCATCCAGTAACGGCCTTCCTTTCCATCAACTACATGGATCGTTTCCTCTCCCTCGTCTCTCTTCCGGTACGATCCAGGTGGGCATTTCAGCTACTATCCGTGGCGTGTTTGTCTGTGGCGGCCAAAATGGAGGAGCCACAAGTGCCTCTCTTGCTTGACCTCCAGCTTTTCCAGCCAACCTTGCTGTTTCACCCCAAAACCCTTCGCAGAATGGAGCTTTGCCTCTTGTCTAATCTCAACTGGACACTCCGTTCCATTACCCCCTTCCATTACCTTCATTATTACCTCACCAACCTCCCTTCTTCTTCTTCTTCTTTCAACCGGTTACAGTTACTCTCCGCTGCCTCCGACCTCATCCTCGCCTCCACCCGTGTGATTAAGTTCTTGGAGTTTCCGCCGTCCGCCGTGGCAGCTGCCGCCGTCCTCTGCTCAGCTGGCCACCACAAGCCTCATGTATTCCACCACAGAGTAAACCATGAAATGGTGAGACGCTGTCACCAACTAATGGAGGACTACGTGCTGGACACGTGTCCCGCATCCACCACCAAAGCCACGCGAGGCCACCCGCCACCTCAAAGCCCCGTCGCCGTCCTCGACGTCTCCACCTGTGCCAGCTGCGACACCCCTTCTTCAGCCCACCCCCAACATGACCCGCCAAACAAGCGGCTGCGATCCTCTGCCCCGGATGTACGGCAGCCGTAA 981 0.5739 MSSSSPDHSTTSASMLCVEDASEAISDHPSPPSLAAVWQPYDDDSDISELIDAEARHMASADYLRRCGDGSVDVSARLDAINWMLKVQAFYEFHPVTAFLSINYMDRFLSLVSLPVRSRWAFQLLSVACLSVAAKMEEPQVPLLLDLQLFQPTLLFHPKTLRRMELCLLSNLNWTLRSITPFHYLHYYLTNLPSSSSSFNRLQLLSAASDLILASTRVIKFLEFPPSAVAAAAVLCSAGHHKPHVFHHRVNHEMVRRCHQLMEDYVLDTCPASTTKATRGHPPPQSPVAVLDVSTCASCDTPSSAHPQHDPPNKRLRSSAPDVRQP* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2289 326 SMART cyclin_7 82 170 IPR013763 -
Ahy9g2289 326 MobiDBLite consensus disorder prediction 299 326 - -
Ahy9g2289 326 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Ahy9g2289 326 PANTHER CYCLIN-D2-1-LIKE 10 299 - -
Ahy9g2289 326 SUPERFAMILY Cyclin-like 42 176 IPR036915 -
Ahy9g2289 326 CDD CYCLIN 77 169 IPR013763 -
Ahy9g2289 326 Gene3D - 49 242 - -
Ahy9g2289 326 SUPERFAMILY Cyclin-like 162 267 IPR036915 -
Ahy9g2289 326 Gene3D - 60 177 - -
Ahy9g2289 326 Pfam Cyclin, C-terminal domain 179 278 IPR004367 -
Ahy9g2289 326 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Ahy9g2289 326 PANTHER CYCLINS 10 299 IPR039361 -
Ahy9g2289 326 SMART Cyclin_C_2 179 299 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2289 Ahy-Chr9 111845767 111847849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2289 47 276 Core Cell Cycle Gene Families AT1G70210 41.079 6.61e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2289 K18810 - gmx:100776178 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3346 19 156409756 156411847 Ahy9g2289 9 111845767 111847849 hybridization