LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2262	ATGGGTTGGAATTGGATGAGGATCACCTTCAACCTTGTCCCAGTATCACTTTCCCTCCTGCTGCTCCTCAATTTTGCAACCACCGCTAAAGCACAAGGTCCCACTTATCTTTACAATATTTGTTCAGACAACAAGACCACTGCCAACAGCCTCTTCAAAAAGGATATTAACACCCTCTTCTCATCTCTCTCTTCCAACGCCACGGCCAACGCTGAATTCTTCAACACCACCGTCCCTGACACAAACTCCAACGACACGGTCTACGGTCTCTTCATGTGCAGGGGCGACTTATCCTCTTGCGGGCAGTGCGTGGTCAACGCCACACAGAAGCTTTCATCCGATGCAAATTGTTCCTTATCGAAACGAGCCATCATTTGGTACGACGAGTGCATGGTTTGGTACTCCAATAACCGCTCTATCTTGTCCACAATGTTCACGAGGCCCGGCGTTTGCCTCTCCAACACGGGGAATGTCTCCAACCAGGAAAGCTTCATGAAGTTGTTGTTCAAAACCATGAATGAAACGGCGAAAGAAGCAGCCAAGTCCCCTGTTCTTGAAAAGAAGTACGCTACAAGGCAAGCCAACATATCTGGTTTTCAGAACCTTTATTGTATGGCTCAGTGTACCGATAACCTCACACCACGAGACTGTGCCAGCTGTCTAACTGAGGCCATAACCAAATTAACTCCTTGTTGTGGAGGAAAGCAGGGAGGGAGGGTTCTATTCCCCAGCTGTTTCGTTCGGTATGAGTTGTACCCTTTCTATAGCTCTAATGCTTTGGCTCCTTCGCCTTCTCCGTCGGCAGGGCTAGTTCCTCCTCCACCTGCAACTAATTCATCTAATTCCGGAGGAAGTAGTGGACTATCATCCGGGACTATTGTTGCAATTGTGGTTCCAATTGCAGTGGCTGTGCTACTGTTTGTTGCGGGCGTTTGTTTCTTAATTAGAAGAAGAGCAAGGAAGAAGCATGACTCTGCACAAGATCCACAAACTGTGACCGAGATCTCTAGCATTGATTCGTTGAGATTTGATTTGAGTACAATTGAAGCAGCCACAAAGAAATTCTCTCAAGATAACAAGCTTGGAGAAGGTGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTTAAGAGGCTCTCTAAAGGATCTGTACAAGGTGGAGAAGAATTCAAGAATGAAGTAGAGCTGGTTGCCAAGCTTCAACATAGATATCTAGTCAGGCTTTTGGGATTTTGCTTGCAAGGAGAAGAGAAGATACTTGTATATGAATATGTACCCAACAAAAGCTTGGACTACATTCTTTTCGATCCTGAGAAACAAGGATTGTTGGATTGGACAAGACGATACAAGATTATTGGAGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCTAGACTTAAAATCATACATCGTGATCTTAAACCTAGCAATATATTGTTGGACGAAGATATGAATCCAAAAATTGCAGATTTTGGTATGGCAAGGTTATTTGCGGTTGATCAAACTCAAGGAAATACTAGCAGGATTGTTGGGACATATGGCTACATGTCCCCGGAGTATGCGATGCACGGAGAGTTCTCGGTTAAGTCTGATGTATACAGTTTTGGAGTCCTTGTTTTGGAGATTATAAGTGGCAAGAAGATCAGCTCTTTCTATGAAACAGATGCTGATGACCTAGTGAGCTATGCTTGGAAACTTTGGAAGGAAGGGACACCCTTGGAATTGATGGATCCCACGTTGAGAAAATCCTATACTCCAAATGAAGTTATGAGATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCAACAATAATGCTTATGCTGGATAGTTATTCTGTTACTCTACCAGTACCTAACCAGCCAGCATTTGTCGTGCACAGCGGAACCGATTCAAACATGCCCAAGGAGCTGCAATTCAGTGGAGCTACAACCAATGTATCAGTGCAAAATTCTGTCAATGAGATGTCAGTTAGCGAAATGGATCCTAGATAA	2043	0.4425	MGWNWMRITFNLVPVSLSLLLLLNFATTAKAQGPTYLYNICSDNKTTANSLFKKDINTLFSSLSSNATANAEFFNTTVPDTNSNDTVYGLFMCRGDLSSCGQCVVNATQKLSSDANCSLSKRAIIWYDECMVWYSNNRSILSTMFTRPGVCLSNTGNVSNQESFMKLLFKTMNETAKEAAKSPVLEKKYATRQANISGFQNLYCMAQCTDNLTPRDCASCLTEAITKLTPCCGGKQGGRVLFPSCFVRYELYPFYSSNALAPSPSPSAGLVPPPPATNSSNSGGSSGLSSGTIVAIVVPIAVAVLLFVAGVCFLIRRRARKKHDSAQDPQTVTEISSIDSLRFDLSTIEAATKKFSQDNKLGEGGFGEVYKGLLPSGQEVAVKRLSKGSVQGGEEFKNEVELVAKLQHRYLVRLLGFCLQGEEKILVYEYVPNKSLDYILFDPEKQGLLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKPSNILLDEDMNPKIADFGMARLFAVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLVLEIISGKKISSFYETDADDLVSYAWKLWKEGTPLELMDPTLRKSYTPNEVMRCIHIGLLCVQEDPADRPTMATIMLMLDSYSVTLPVPNQPAFVVHSGTDSNMPKELQFSGATTNVSVQNSVNEMSVSEMDPR*	681

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g2262	680	ProSiteProfiles	Protein kinase domain profile.	355	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2262	680	Pfam	Salt stress response/antifungal	151	252	IPR002902	-
	Ahy9g2262	680	Pfam	Salt stress response/antifungal	41	136	IPR002902	-
	Ahy9g2262	680	Pfam	Protein kinase domain	356	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2262	680	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	476	488	IPR008271	GO:0004672\|GO:0006468
	Ahy9g2262	680	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	19	678	-	-
	Ahy9g2262	680	ProSiteProfiles	Gnk2-homologous domain profile.	146	254	IPR002902	-
	Ahy9g2262	680	Gene3D	-	33	138	IPR038408	-
	Ahy9g2262	680	Gene3D	-	149	254	IPR038408	-
	Ahy9g2262	680	SUPERFAMILY	Protein kinase-like (PK-like)	340	648	IPR011009	-
	Ahy9g2262	680	Gene3D	Transferase(Phosphotransferase) domain 1	431	633	-	-
	Ahy9g2262	680	ProSiteProfiles	Gnk2-homologous domain profile.	34	139	IPR002902	-
	Ahy9g2262	680	CDD	STKc_IRAK	361	626	-	-
	Ahy9g2262	680	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	19	678	-	-
	Ahy9g2262	680	ProSitePatterns	Protein kinases ATP-binding region signature.	361	383	IPR017441	GO:0005524
	Ahy9g2262	680	SMART	serkin_6	355	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2262	680	Gene3D	Phosphorylase Kinase; domain 1	316	430	-	-
	Ahy9g2262	680	MobiDBLite	consensus disorder prediction	265	284	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2262	Ahy-Chr9	111610749	111613931	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2262	16	680	Receptor kinase-like Gene Family	AT4G05200	53.019	0.0	669

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Ahy9g2262		Pkinase	3.60E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2262	-		-	aip:107616499	1229.93