Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2258 ATGTTCGACACCAAAAATATCACACTACCATTCTTACTTAGAACCCTAACACTAACAGTACTTTTGACTTCAGAACATGCCTCAGCTTCTGTTTTCGATTCAGTCAACTGCACAACCAACTCCACCTTCGCTCCAAACAGCACCTTCGACGTCAACCTCAGCACACTCTTCTCATATCTTACTTCCAACGTCACCAACGGCAACAATCTCAGGTTCTTCAACGCAACTGCAGGCTCTCACGGTTCAGACGCCGCCGTCTACGGCCTCTTCATGTGCCGTGGTGACGTGCCACTTGCACTGTGCCGAGAGTGCGTCGGTTTCGCAGCGCAGAACATAGCCTCGTCGTGTCCCTCTGCTAACGAGGCTGTCATCTGGTACAACGAGTGCTTGTTACGCTACTCCAACAGATTCTTCTTCTCCACCATGGACGAATGGCCAAGGTACCAGATCAAGATCCCGTTGGGGGACCCTGTGGTTTTGCACAGCAAAGGTTTCTACAGTGCTTTAGGGTCCATATTCAATGGGATTGGAAATGAAGCAGCCTTGGCTCTTGGCGGTTCTGATAACAAGTATGCAGTGAAACAAGCTGCCGCCACGGCCACCACCACAGTGTACGGTCTTGCTCAGTGCACGCCGGACCTCTCAGCCGCTGACTGCAAGCGGTGTATCGTGGACGCGGCGGCTGAATTTCCAAGGACTTGCTGCGGCGGGAGCATAGGGGGAAGTGTTATGTTTCCAAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGTACCTCCGGGACATTAACAACAACTAATAAGGGAGGAGGAAATAGCAGAACACAAGTGATTGCTATGGTTGCAGTTGTGGTTGTGATTTTGGTGATGGTTTTATGCTTTGGCTACTTTTACCTTCGAAGAAAACTGAGGAAGAGACGCAAGACTGGTCTCAGAATCAGAAAAAACTGTAATTCCATTAGGCCTGATATGAGTGCCTCAGAGTCTTTTGAATTTGATTTGGATACAATTCAATTCGCAACAAACAATTTTTCTCAAGGGAGCAGGATAGGCAAAGGAGGGTATGGAGAAGTCTACAAGGGAATTCTTCCTAGCGGAGAAGAAATAGCAGTGAAGAGGCTCTCAAGAAATTCTGGACAGGGGGTGGAGGAGTTCAAGAATGAAGTATTGTTGATAGCTAAACTTCAGCACAGGAATTTGGTGAGGTTAATGGGATTCTGTCTCGAAGATCAAGAGAGTATACTTATCTATGAATATGTACCTAACAAGAGCCTTGATCACTTCCTATTTGATCCCTCCAAGCGAAGAGAATTAACTTGGTCGCAACGTTATAAAATCATAAAAGGAATTGTTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCATGATAATACATCGAGACCTCAAACCAAGCAATGTTCTACTAGATAATCACATGAATCCCAAAATTTCTGACTTTGGAATGGCGAGGATAGTAGATACGGATCACATCCAAGGATGTACTAACAGAGTAGTGGGCACATATGGTTATATGTCTCCCGAATATGCAATGCATGGACAATTTTCTGTAAAATCAGATGTTTTTAGTTTTGGAGTCATGGTTCTTGAGATTTTAAGTGGAAAGAAGAATTCTTCTTCTTTTGATTCATGTCGTATTGACGACCTCTTGAGTTATGCATGGAAACTGTGGAATAGTGATGAATCAGTATTTCAATTGCTGGATCCAGTTCTGCAAGAATCTTATAATCCAAATGAAGTTGAAAGATGTATTCAGATTGGATTATTGTGTGTACAAGAAAATCCAGATGAGAGGCCTACAATGGGGACCATAGCTTCATATCTTACAAATGATTCAGTTGAAATGCCATATCCTCAGGAACCAGCATTTTTCATGAAAGGAAGGACAAGAAGGCATGCATCTGGACATGAATCATATTCATCAGAATCTATACTAAAGAGATATTGGAAAGAATTGGTAGGAAGGACATAA 2007 0.4335 MFDTKNITLPFLLRTLTLTVLLTSEHASASVFDSVNCTTNSTFAPNSTFDVNLSTLFSYLTSNVTNGNNLRFFNATAGSHGSDAAVYGLFMCRGDVPLALCRECVGFAAQNIASSCPSANEAVIWYNECLLRYSNRFFFSTMDEWPRYQIKIPLGDPVVLHSKGFYSALGSIFNGIGNEAALALGGSDNKYAVKQAAATATTTVYGLAQCTPDLSAADCKRCIVDAAAEFPRTCCGGSIGGSVMFPSCIVRYETYPFYQHSGTSGTLTTTNKGGGNSRTQVIAMVAVVVVILVMVLCFGYFYLRRKLRKRRKTGLRIRKNCNSIRPDMSASESFEFDLDTIQFATNNFSQGSRIGKGGYGEVYKGILPSGEEIAVKRLSRNSGQGVEEFKNEVLLIAKLQHRNLVRLMGFCLEDQESILIYEYVPNKSLDHFLFDPSKRRELTWSQRYKIIKGIVRGILYLHEDSRLMIIHRDLKPSNVLLDNHMNPKISDFGMARIVDTDHIQGCTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEILSGKKNSSSFDSCRIDDLLSYAWKLWNSDESVFQLLDPVLQESYNPNEVERCIQIGLLCVQENPDERPTMGTIASYLTNDSVEMPYPQEPAFFMKGRTRRHASGHESYSSESILKRYWKELVGRT* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2258 668 Pfam Salt stress response/antifungal 165 255 IPR002902 -
Ahy9g2258 668 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Ahy9g2258 668 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 645 - -
Ahy9g2258 668 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2258 668 ProSiteProfiles Gnk2-homologous domain profile. 146 257 IPR002902 -
Ahy9g2258 668 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Ahy9g2258 668 SUPERFAMILY Protein kinase-like (PK-like) 334 650 IPR011009 -
Ahy9g2258 668 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Ahy9g2258 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 645 - -
Ahy9g2258 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Ahy9g2258 668 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2258 668 CDD STKc_IRAK 354 622 - -
Ahy9g2258 668 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Ahy9g2258 668 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy9g2258 668 Gene3D - 30 138 IPR038408 -
Ahy9g2258 668 Gene3D - 159 257 IPR038408 -
Ahy9g2258 668 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2258 Ahy-Chr9 111563912 111567966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2258 37 638 Receptor kinase-like Gene Family AT4G05200 46.042 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy9g2258 Pkinase 5.70E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2258 - - var:108324780 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3380 19 156632655 156636635 Ahy9g2258 9 111563912 111567966 hybridization