LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy9g2248	ATGTTTTCCATGGACATGGACATGGAACAAAGCAGTGTAAAGTCCCTTTCTAAAAGAAATCAACAAAGGTTGGCTAAGATAATAAAGAATGTGCATTTGAAGAGCATGATCATCAAAATAAAGTTTCTGCTGCTACTCTCCATCACATGGTTTTGTTCTTCTTCTACAACTACTTCACCAGATACCAATTTCCCACATGTCTGTAACTGCACAAGAAACAGCACCTTTGAGTTAAACACCACCTACCATACCAACCTCAAAACTCTTCTATCTTGGCTTTCTTCCAATGCCACTAACTCTGCCGGATCCCACATCACCAAGGTTTCTTCTGGTAACAGCAGTGTCTATGGCCTCTTCCAGTGCAATGCAGATATAACGCCAGAGAAATGCCAAAAGTGCATCGATCAAGCAGTGTATAATGTAACATCAGAGTGTGCAACATCAAAGGAAGCTGTGGTATTTGTCAAATTCTGCTTCCTACGTTACTCTTACAGAGATTTCTTAACAATAGCAGAAGAAAGCCCTAAAATCTTCTTGCTGAACCTCAAGGACTACGTTGGCCAACTTGCTACCTTCAACAATGAAGTGTCGGAGATGATGTATACTCTAAGGCATGCGGTTGCTGATATTCCCATGGGTTCTAGAAGGTTCGTGTACGGGGAACTCAACATCACAGCTAAACAAAGCCTTTATGGCATGGCAAAGTGCACCCCGGACTTGCCCCCTGAGGAATGCAGCTCGTGTCTTGTAAACGCCGCGGCTGACATTCCGACCGGTTGTTGCAAAGGAAAGATCGGAGGAAGGGTTCTTTTTCCCAGTTGTGGCGTTAGATTTGAGCTTTATCGATTTTATGAGCCATCATCTCATCTGAATATTTTGAGACTTGGAGGAAATAGGAAAAACAGGTCACACCAGAGACAGATTATTATTTCCATCATCTCAACTGTTGTTTCTGTGCTGCTGCTATGTTTTGGTTGCTCTTTATGTTTCCTAAGTCGACGACGACAAAGGAAGCTTCTTAGGGGAATTCTTCTTAGAGAAAGCTTTGGGGATGAATCATTGGCTTCTTTTGAGTCTTTACAATTTCAGTTGAGTGAAATTCAAGCTGCTACCAACAACTTCTCCCAAGGAAACAAGATAGGAAGAGGTGGATTTGGGGAAGTTTACAAGGGTGTTCTTGAAAATGGGCAAGAAGTAGCAGCAAAGAGACTCTTGGGAAACTCTTGGCAAGGTGCAGAAGAATTTAAGAATGAGGTTCTTGTTATGGCCAAGCTTCAACATAAAAATCTGGTCAGATTACTGGGGTTTTGTTTGGAAGGACAAGAGAAGATACTTGTCTACGAATATGTCCCCAACAAGAGCCTTGACTACATTTTATTTGATCCTCAGAGAAGCAGGCCATTAACTTGGTCTGAACGATACAAGATTATTAGAGGAATTGCGCGAGGAATTTTATACCTTCATGAAGATTCTCGTTTGACAATCATCCATCGAGATCTTAAACCAAGTAATATTTTATTAGATGATGGTATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATAGTAATTACAGATCAAATTCAAGTGAATACTCATAGGGTTGTTGGCACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGAATATTTTCGATAAAATCTGACGTGTATAGTTTTGGAATCATAGTACTTGAGATTATCAGTGGAAAATCGAAAAATTCTTTTTGTGAACCACACTTCTCAGATGACATCCGACTTTCTGCATGGGCAAAATGGAAGGAAGAAAAGCCATTGGAATTATTGGATACAACTTTAAAAGGAAATTATTCTGAAAATGAAGTGATGAGAAGTATACAGATTGCCCTGTTATGTGTTCAAGATGATCCAAATGAGAGGCCTACAATGACAGAAATTGTGTCATACCTCAGTAGTTCTTCAGGGGAAGTACCTTTGCCTCAAGAACCAATAGTTTCAAAAAGTAAAAAGATGGATTATATGTCTTACTACCACAAAACGCATTCCATAAATGATTCTATCAACGATTTGTCAGTGAGCACATTTCTCCCTAGATAA	2082	0.3963	MFSMDMDMEQSSVKSLSKRNQQRLAKIIKNVHLKSMIIKIKFLLLLSITWFCSSSTTTSPDTNFPHVCNCTRNSTFELNTTYHTNLKTLLSWLSSNATNSAGSHITKVSSGNSSVYGLFQCNADITPEKCQKCIDQAVYNVTSECATSKEAVVFVKFCFLRYSYRDFLTIAEESPKIFLLNLKDYVGQLATFNNEVSEMMYTLRHAVADIPMGSRRFVYGELNITAKQSLYGMAKCTPDLPPEECSSCLVNAAADIPTGCCKGKIGGRVLFPSCGVRFELYRFYEPSSHLNILRLGGNRKNRSHQRQIIISIISTVVSVLLLCFGCSLCFLSRRRQRKLLRGILLRESFGDESLASFESLQFQLSEIQAATNNFSQGNKIGRGGFGEVYKGVLENGQEVAAKRLLGNSWQGAEEFKNEVLVMAKLQHKNLVRLLGFCLEGQEKILVYEYVPNKSLDYILFDPQRSRPLTWSERYKIIRGIARGILYLHEDSRLTIIHRDLKPSNILLDDGMNPKISDFGMARIVITDQIQVNTHRVVGTYGYMSPEYAMEGIFSIKSDVYSFGIIVLEIISGKSKNSFCEPHFSDDIRLSAWAKWKEEKPLELLDTTLKGNYSENEVMRSIQIALLCVQDDPNERPTMTEIVSYLSSSSGEVPLPQEPIVSKSKKMDYMSYYHKTHSINDSINDLSVSTFLPR*	694

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy9g2248	693	ProSiteProfiles	Protein kinase domain profile.	374	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2248	693	Pfam	Protein tyrosine and serine/threonine kinase	376	645	IPR001245	GO:0004672\|GO:0006468
	Ahy9g2248	693	SMART	serkin_6	374	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy9g2248	693	ProSitePatterns	Protein kinases ATP-binding region signature.	380	402	IPR017441	GO:0005524
	Ahy9g2248	693	CDD	STKc_IRAK	380	645	-	-
	Ahy9g2248	693	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	495	507	IPR008271	GO:0004672\|GO:0006468
	Ahy9g2248	693	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	69	289	-	-
	Ahy9g2248	693	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	298	686	-	-
	Ahy9g2248	693	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	69	289	-	-
	Ahy9g2248	693	ProSiteProfiles	Gnk2-homologous domain profile.	173	283	IPR002902	-
	Ahy9g2248	693	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	298	686	-	-
	Ahy9g2248	693	Gene3D	Phosphorylase Kinase; domain 1	344	449	-	-
	Ahy9g2248	693	ProSiteProfiles	Gnk2-homologous domain profile.	63	167	IPR002902	-
	Ahy9g2248	693	SUPERFAMILY	Protein kinase-like (PK-like)	359	674	IPR011009	-
	Ahy9g2248	693	Pfam	Salt stress response/antifungal	190	281	IPR002902	-
	Ahy9g2248	693	Pfam	Salt stress response/antifungal	68	163	IPR002902	-
	Ahy9g2248	693	Gene3D	Transferase(Phosphotransferase) domain 1	450	655	-	-
	Ahy9g2248	693	Gene3D	-	180	283	IPR038408	-
	Ahy9g2248	693	Gene3D	-	63	167	IPR038408	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy9g2248	Ahy-Chr9	111453168	111456210	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy9g2248	45	656	Receptor kinase-like Gene Family	AT4G05200	46.994	0.0	551

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Ahy9g2248		PK_Tyr_Ser-Thr	2.20E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy9g2248	-		-	adu:107467162	1327.77